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NECEvent2014_6_5_scaffold_498

Alias: 176_005_scaffold_498

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_498_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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48..353
DNA (306bp) protein (102aa)
phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:KHD15397.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.
NECEvent2014_6_5_scaffold_498_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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623..1969
DNA (1347bp) protein (449aa)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system lactose/cellobiose family transporter subunit IIC
NECEvent2014_6_5_scaffold_498_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2374..3702
DNA (1329bp) protein (443aa)
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:KJZ85097.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
carbohydrate ABC transporter substrate-binding protein, CUT1 family
NECEvent2014_6_5_scaffold_498_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3819..4721
DNA (903bp) protein (301aa)
Sugar ABC transporter permease {ECO:0000313|EMBL:ETI90786.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_
carbohydrate ABC transporter membrane protein 1, CUT1 family
NECEvent2014_6_5_scaffold_498_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4744..5664
DNA (921bp) protein (307aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ89621.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
NECEvent2014_6_5_scaffold_498_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5826..6341
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD15401.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_6_5_scaffold_498_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6482..6910
DNA (429bp) protein (143aa)
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EEP52780.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
RNA polymerase subunit sigma-24
NECEvent2014_6_5_scaffold_498_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6903..7748
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP52873.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_6_5_scaffold_498_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7872..8636)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ89606.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator
NECEvent2014_6_5_scaffold_498_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8787..8924
DNA (138bp) protein (46aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP52644.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
NECEvent2014_6_5_scaffold_498_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8890..9642
DNA (753bp) protein (251aa)
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ35471.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
ABC transporter-like protein
NECEvent2014_6_5_scaffold_498_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9639..12320
DNA (2682bp) protein (894aa)
Ferric iron ABC transporter, permease protein {ECO:0000313|EMBL:KJZ85079.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ABC-type transporter, integral membrane subunit
NECEvent2014_6_5_scaffold_498_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12364..13455
DNA (1092bp) protein (364aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoe
2-aminoethylphosphonate/pyruvate transaminase
NECEvent2014_6_5_scaffold_498_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13458..14288
DNA (831bp) protein (277aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phospho
Phosphonoacetaldehyde hydrolase (EC:3.11.1.1)
NECEvent2014_6_5_scaffold_498_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14233..15621
DNA (1389bp) protein (463aa)
Acetylornithine transaminase (EC:2.6.1.11)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35475.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_498_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16019..16873)
DNA (855bp) protein (285aa)
Beta-glucanase (Endo-beta-1,3-1,4 glucanase)(1,3-1,4-beta-D-glucan 4-glucanohydrolase) (Lichenase) {ECO:0000313|EMBL:EEP52790.1}; EC=3.2.1.73 {ECO:0000313|EMBL:EEP52790.1};; TaxID=632245 species="Bact
bglA2; beta-glucanase BglA (EC:3.2.1.73)
NECEvent2014_6_5_scaffold_498_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17124..19310
DNA (2187bp) protein (729aa)
Cadmium-transporting ATPase {ECO:0000313|EMBL:KJZ85086.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KJZ85086.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
cation transport ATPase
NECEvent2014_6_5_scaffold_498_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19365..19622
DNA (258bp) protein (86aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ35478.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
cation transport ATPase
Displaying 18 items

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