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NECEvent2014_6_5_scaffold_749

Alias: 176_005_scaffold_749

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_749_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(118..2406)
DNA (2289bp) protein (763aa)
Rad3-like DNA helicase (EC:3.6.4.12)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30660.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_749_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2531..3121)
DNA (591bp) protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30661.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF1836
NECEvent2014_6_5_scaffold_749_3

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4016..4258
DNA (243bp) protein (81aa)
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ETJ16625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
NECEvent2014_6_5_scaffold_749_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4355..5200)
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
rsmI; ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
NECEvent2014_6_5_scaffold_749_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5204..5956)
DNA (753bp) protein (251aa)
tRNA (Adenine37-N(6))-methyltransferase TrmN6 {ECO:0000313|EMBL:KJZ85721.1}; EC=2.1.1.223 {ECO:0000313|EMBL:KJZ85721.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
small; methyltransferase Small
NECEvent2014_6_5_scaffold_749_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6351..7631)
DNA (1281bp) protein (427aa)
Glycoside hydrolase {ECO:0000313|EMBL:KHD15458.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
protein P54
NECEvent2014_6_5_scaffold_749_trna_1
unknown

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7922..7994
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_749_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8081..8725
DNA (645bp) protein (215aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EEP55867.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
haloacid dehalogenase superfamily
NECEvent2014_6_5_scaffold_749_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8818..9561)
DNA (744bp) protein (248aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
PpiC-type peptidyl-prolyl cis-trans isomerase
NECEvent2014_6_5_scaffold_749_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9713..10390
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
ung; uracil-DNA glycosylase Ung (EC:3.2.2.27)
NECEvent2014_6_5_scaffold_749_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10475..10660)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ85700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_6_5_scaffold_749_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10901..11311
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30670.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_5_scaffold_749_trna_2
unknown

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comp(11526..11598)
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_749_12

Not on your lists

comp(11921..12550)
DNA (630bp) protein (210aa)
Resolvase/recombinase {ECO:0000313|EMBL:ETJ16634.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
site-specific recombinase, DNA invertase Pin
Displaying 14 items

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