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NECEvent2014_6_5_scaffold_760

Alias: 176_005_scaffold_760

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_760_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(67..192)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI88532.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_760_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(226..852)
DNA (627bp) protein (209aa)
Accessory regulator B superfamily protein {ECO:0000313|EMBL:ETI88531.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
accessory gene regulator B superfamily
NECEvent2014_6_5_scaffold_760_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(839..1303)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI88530.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_760_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1297..1851)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI88529.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_760_trna_2
unknown

Not on your lists

comp(2112..2194)
DNA (83bp)
transferRNA
NECEvent2014_6_5_scaffold_760_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2313..2936)
DNA (624bp) protein (208aa)
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:KJZ96932.1}; EC=3.2.1.- {ECO:0000313|EMBL:KJZ96932.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
soluble lytic murein transglycosylase
NECEvent2014_6_5_scaffold_760_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2951..3550)
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1523156 species="Bacteria; F
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
NECEvent2014_6_5_scaffold_760_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3688..6558)
DNA (2871bp) protein (957aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:ENZ35778.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_760_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6766..7992
DNA (1227bp) protein (409aa)
Aminopeptidase S (Leu, Val, Phe, Tyr preference) {ECO:0000313|EMBL:KJZ83190.1}; EC=3.4.11.24 {ECO:0000313|EMBL:KJZ83190.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ampS; aminopeptidase AmpS (EC:3.4.11.-)
NECEvent2014_6_5_scaffold_760_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8125..8580)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ83207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_760_trna_1
unknown

Not on your lists

comp(8853..8924)
DNA (72bp)
transferRNA
NECEvent2014_6_5_scaffold_760_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9148..10341)
DNA (1194bp) protein (398aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
isocitrate dehydrogenase (EC:1.1.1.42)
NECEvent2014_6_5_scaffold_760_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10509..11516)
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35769.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_6_5_scaffold_760_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11803..12681)
DNA (879bp) protein (293aa)
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ83238.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
LysR family transcriptional regulator
Displaying 14 items

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