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NECEvent2014_6_5_scaffold_1139

Alias: 176_005_scaffold_1139

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_1139_trna_1
unknown

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150..221
DNA (72bp)
transferRNA
NECEvent2014_6_5_scaffold_1139_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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582..1529
DNA (948bp) protein (316aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ89176.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ89176.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
polysaccharide deacetylase
NECEvent2014_6_5_scaffold_1139_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1833..2318
DNA (486bp) protein (162aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA polymerase sigma factor
NECEvent2014_6_5_scaffold_1139_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2323..3156
DNA (834bp) protein (278aa)
TldE protein, part of TldE/TldD proteolytic complex {ECO:0000313|EMBL:KJZ85511.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
rsiV; extracytoplasmic function (ECF) anti-sigmafactor rsiV
NECEvent2014_6_5_scaffold_1139_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3547..4926
DNA (1380bp) protein (460aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ31262.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
TldD protein
NECEvent2014_6_5_scaffold_1139_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4929..6272
DNA (1344bp) protein (448aa)
TldE protein, part of TldE/TldD proteolytic complex {ECO:0000313|EMBL:KJZ89170.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
pmbA; protein PmbA
NECEvent2014_6_5_scaffold_1139_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6362..7153)
DNA (792bp) protein (264aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ85474.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
Displaying 7 items

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