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NECEvent2014_6_5_scaffold_179_25

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 25760..26443

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ETI87426.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 227.0
  • Bit_score: 431
  • Evalue 5.40e-118
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 180.0
  • Bit_score: 245
  • Evalue 1.10e-62

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGATACTCTTTTGCTTTGAAGAAATTTATATAAATTTTAATGAACCAATTGATGAGTTGAAAGCTCTAATATATAGATGCATCGATAAGAAAGGAGCTAGTAGAAATTTGGATGAAAAAGAACTTATTATAAAAATCCAGTCTGGTGATATGAATGCCTTTGCAATTATTTTTGAAAAATATAAAAATGAAGCAGTAAGATATTCATATCTTATTATAGGTAATAAACATACAAGTGAGGATATTGTTCAGGAGGCTTTTGTAACATGTTATACAAAAATAAAATCATTAAAAAAGCAAGAACAATTTAAATCTTGTTTTTTTAAAATACTTACACGAATTGCATGGAAATATTATAAAAAAGAAAAGAAATCAGTACCAGTTGATAATATTTTTGAAAAAGCAGATTATGAAACAAATTGTGAGGCTATAAGTAAGTATATAAAAAAAGAGCAAGCTGATATTCTGCATGAGGTAATTGATGAGCTTGATATAAAACAAAAAATGGTCATAATTCTTTATTATTTTAATGAACTTACAATAAAAGAAATTGCACAAATAATGGAGTGCTTTGAGGGAACTGTTAAATCACGACTTTATACTGCAAGAAAAAAGTTGAAAAAGAGTTTAATGGATTTTGATAAATGTGAGGATATAAGAGAAAAGGAGTATGGAGTTTTATGA
PROTEIN sequence
Length: 228
MILFCFEEIYINFNEPIDELKALIYRCIDKKGASRNLDEKELIIKIQSGDMNAFAIIFEKYKNEAVRYSYLIIGNKHTSEDIVQEAFVTCYTKIKSLKKQEQFKSCFFKILTRIAWKYYKKEKKSVPVDNIFEKADYETNCEAISKYIKKEQADILHEVIDELDIKQKMVIILYYFNELTIKEIAQIMECFEGTVKSRLYTARKKLKKSLMDFDKCEDIREKEYGVL*