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NECEvent2014_6_5_scaffold_179

Alias: 176_005_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_179_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..264
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91146.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_6_5_scaffold_179_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(312..1736)
DNA (1425bp) protein (475aa)
Stage V sporulation protein AF (SpoVAF) {ECO:0000313|EMBL:KJZ83023.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
spoVAF; stage V sporulation protein AF
NECEvent2014_6_5_scaffold_179_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2013..3860
DNA (1848bp) protein (616aa)
Asparagine synthetase glutamine-hydrolyzing {ECO:0000313|EMBL:KJZ83034.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KJZ83034.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
asnO; asparagine synthetase (EC:6.3.5.4)
NECEvent2014_6_5_scaffold_179_4
unknown

Not on your lists

comp(3793..3945)
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_179_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3938..4240)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP53634.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_6_5_scaffold_179_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4517..8167
DNA (3651bp) protein (1217aa)
Subtilase family protein {ECO:0000313|EMBL:KJZ83045.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJZ83045.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
subtilisin like protease
NECEvent2014_6_5_scaffold_179_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8254..8673
DNA (420bp) protein (140aa)
DUF327 domain-containing protein {ECO:0000313|EMBL:KJZ83098.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_6_5_scaffold_179_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8924..9922
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35871.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
NECEvent2014_6_5_scaffold_179_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9897..10661
DNA (765bp) protein (255aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:KJZ83085.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
NECEvent2014_6_5_scaffold_179_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10645..11313
DNA (669bp) protein (223aa)
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000313|EMBL:EEP53496.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEP53496.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 2 (EC:3.6.3.-)
NECEvent2014_6_5_scaffold_179_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11371..11622)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ83027.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_179_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11715..13421
DNA (1707bp) protein (569aa)
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35875.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_179_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13626..13940
DNA (315bp) protein (105aa)
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thioredoxin
NECEvent2014_6_5_scaffold_179_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14002..15030)
DNA (1029bp) protein (343aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KJZ83032.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KJZ83032.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
ilvE2; branched-chain-amino-acid aminotransferase IlvE (EC:2.6.1.42)
NECEvent2014_6_5_scaffold_179_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15389..17287)
DNA (1899bp) protein (633aa)
nadE; glutamine-dependent NAD(+) synthetase NadE (EC:6.3.5.1)
NAD+ synthetase {ECO:0000313|EMBL:ENZ35878.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_179_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17805..18236
DNA (432bp) protein (144aa)
Putative activity regulator of membrane protease YbbK {ECO:0000313|EMBL:KJZ83110.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
hypothetical protein
NECEvent2014_6_5_scaffold_179_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18240..19184
DNA (945bp) protein (315aa)
Putative stomatin/prohibitin-family membrane protease subunit YbbK {ECO:0000313|EMBL:KJZ83065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
qmcA; protein QmcA
NECEvent2014_6_5_scaffold_179_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19479..20762
DNA (1284bp) protein (428aa)
Proton/glutamate symport protein Sodium/glutamate symport protein {ECO:0000313|EMBL:KJZ83060.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
proton glutamate symport protein
NECEvent2014_6_5_scaffold_179_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20924..21433
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ83086.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_179_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21697..22515
DNA (819bp) protein (273aa)
Amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:KJZ83070.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
fliY1; cystine-binding periplasmic protein FliY
NECEvent2014_6_5_scaffold_179_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22594..23214
DNA (621bp) protein (207aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:ENZ35884.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
polar amino acid ABC transporter inner membrane subunit
NECEvent2014_6_5_scaffold_179_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23226..23909
DNA (684bp) protein (228aa)
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KJZ83075.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
ABC transporter
NECEvent2014_6_5_scaffold_179_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24061..24228
DNA (168bp) protein (56aa)
Conserved domain protein {ECO:0000313|EMBL:EEP53801.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
zinc-binding domain-containing protein
NECEvent2014_6_5_scaffold_179_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24447..25709
DNA (1263bp) protein (421aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ83071.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
voltage gated chloride channel family
NECEvent2014_6_5_scaffold_179_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25760..26443
DNA (684bp) protein (228aa)
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ETI87426.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
RNA polymerase, sigma-24 subunit, ECF subfamily
NECEvent2014_6_5_scaffold_179_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26440..27252
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ83087.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_179_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27685..29115
DNA (1431bp) protein (477aa)
ansB1; aspartate ammonia-lyase AnsB (EC:4.3.1.1)
Aspartate ammonia-lyase {ECO:0000313|EMBL:ENZ35890.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_179_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29590..33336
DNA (3747bp) protein (1249aa)
Phosphoribosylformylglycinamidine synthase, synthetase/glutamine amidotransferase subunit {ECO:0000313|EMBL:KJZ83041.1}; EC=6.3.5.3 {ECO:0000313|EMBL:KJZ83041.1};; TaxID=1523154 species="Bacteria; Fir
purL; phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
NECEvent2014_6_5_scaffold_179_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33594..34073
DNA (480bp) protein (160aa)
purE; N5-carboxyaminoimidazole ribonucleotide mutase PurE (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000313|EMBL:KHD15614.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
NECEvent2014_6_5_scaffold_179_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34073..34780
DNA (708bp) protein (236aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Displaying items 1-30 of 37 in total

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