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NECEvent2014_6_5_scaffold_533_1

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(518..922)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding protein, contains ribosomal protein S1 domain {ECO:0000313|EMBL:KJZ84730.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 260
  • Evalue 1.30e-66
RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 133.0
  • Bit_score: 244
  • Evalue 1.50e-62

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 405
ATGACCTTAATGGCAGGAAACATAGTAGAAGGCACAGTGATAAACATCACAAATTTTGGAGCTTTTATAGAAGTTGAAGGAAAGACTGGATTAGTTCATATCTCAGAAGTAGCGGATTCTTATGTAAAAGACATTAGAGAACATCTTAATGAGCAAGATAAAGTAAAAGTAAAGGTTATTTCAATTGATGATAATGGGAAGATTAGTCTTTCAATAAAGCAGGCTAACATTCAAAAAAAGTCAGTTAAGCCAGCAGAAGTTGATTGGAATGTATCTGAAAAGAAAAAAGCAACTGGAAATTTTGAAGATATAATGTCAAAATTTTTAAAAGATAGTGAAGAAAGAATGCAGGATGTAAAAAAACATCAAGAATTTAAGGGTAAAGGTGGAAGAAAAGGCTGCTAA
PROTEIN sequence
Length: 135
MTLMAGNIVEGTVINITNFGAFIEVEGKTGLVHISEVADSYVKDIREHLNEQDKVKVKVISIDDNGKISLSIKQANIQKKSVKPAEVDWNVSEKKKATGNFEDIMSKFLKDSEERMQDVKKHQEFKGKGGRKGC*