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NECEvent2014_6_5_scaffold_613_9

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(13088..13930)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-arabinosides ABC transport system, permease protein AraQ {ECO:0000313|EMBL:KJZ83770.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 280.0
  • Bit_score: 545
  • Evalue 5.40e-152
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 272.0
  • Bit_score: 410
  • Evalue 5.50e-112

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 843
ATGAGTAAGAAAAAAATTGATAAATCAATGGTTTTAAAATATGTATTTTTAAGCATCGCAGCATTTGTTTCTATATTTCCTTTTTTCTGGATGATTATAAGTGCTACTAATAAATCTGTTGATGTTACGAGAGGAAAACTAACATTTGGAACTCACTTTATAGCAAATTTAACAAATCTTTTAAGTTCAGATTTGGGATTTATGCGATCATTAGGAAATTCTGCAGTAATTGCAATAATAACAACATCTTTAGCATTATTAGTATCATCAATTGCAGGGTATGGGTTTGAAATATTTCGAACACCTACAAGGGACAAAGTTTTCACACTACTTCTTTTATCAATGATGGTTCCTTTTTCAGCATTAATGATTCCTCTTTATAAATTCTTTGGATCATTAAATGGAACACCATTAAGTTTTATGGGATTAAATTCATATTTAGCAGTAATATTTCCGAGTATATCCACAGCATTTTTGATCTTCTTCTTTAGGCAGAATACAAAGTCTTTTCCAAAAGATATATTAGAAGCTGCAAGAATTGATGGATTAGGAGAACTTGCAATATTCTTTAAGATGTATATGCCAACCATGAAAACTACTTATGCAGCAGGTGCAATAATAACATTCATGAGTAGTTGGAATAACTATCTATGGCCATTATTAGTATTACAGTCACCAGAAAAAAGAACTGTACCATTAATAATATCTACATTAGGATCAAGTTATTCTCCTGACTATGGATTGATAATGGTAGCAATAGTAATAGCAACATTACCAACAGCATTTGTATTCTTCACAATGCAGAAACATTTCGTTGCAGGTATGATTGGATCAGTTAAATAA
PROTEIN sequence
Length: 281
MSKKKIDKSMVLKYVFLSIAAFVSIFPFFWMIISATNKSVDVTRGKLTFGTHFIANLTNLLSSDLGFMRSLGNSAVIAIITTSLALLVSSIAGYGFEIFRTPTRDKVFTLLLLSMMVPFSALMIPLYKFFGSLNGTPLSFMGLNSYLAVIFPSISTAFLIFFFRQNTKSFPKDILEAARIDGLGELAIFFKMYMPTMKTTYAAGAIITFMSSWNNYLWPLLVLQSPEKRTVPLIISTLGSSYSPDYGLIMVAIVIATLPTAFVFFTMQKHFVAGMIGSVK*