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NECEvent2014_6_5_scaffold_613

Alias: 176_005_scaffold_613

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_613_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_613_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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266..1123
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ96373.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DNA-binding domain-containing protein, AraC-type
NECEvent2014_6_5_scaffold_613_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1248..4274)
DNA (3027bp) protein (1009aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154};
cbgA; beta-galactosidase CbgA (EC:3.2.1.23)
NECEvent2014_6_5_scaffold_613_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4322..5392)
DNA (1071bp) protein (357aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=997898 species="Bacteria; Firmicutes; Clost
mro; aldose 1-epimerase Mro (EC:5.1.3.3)
NECEvent2014_6_5_scaffold_613_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5568..7115
DNA (1548bp) protein (516aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35674.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
two component transcriptional regulator, AraC family
NECEvent2014_6_5_scaffold_613_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7147..8940
DNA (1794bp) protein (598aa)
Histidine kinase {ECO:0000313|EMBL:KHD16513.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
histidine kinase internal region
NECEvent2014_6_5_scaffold_613_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8994..10688)
DNA (1695bp) protein (565aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35672.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
NECEvent2014_6_5_scaffold_613_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10836..12920)
DNA (2085bp) protein (695aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=997898 species="Bacteria; Firmicutes; Clostridi
pbg; beta-galactosidase Pbg (EC:3.2.1.23)
NECEvent2014_6_5_scaffold_613_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13088..13930)
DNA (843bp) protein (281aa)
Alpha-arabinosides ABC transport system, permease protein AraQ {ECO:0000313|EMBL:KJZ83770.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
binding-protein-dependent transport systems inner membrane component
NECEvent2014_6_5_scaffold_613_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13923..14816)
DNA (894bp) protein (298aa)
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:EEP53858.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
binding-protein-dependent transport systems inner membrane component
NECEvent2014_6_5_scaffold_613_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14982..16286)
DNA (1305bp) protein (435aa)
ABC transporter sugar binding protein {ECO:0000313|EMBL:KJZ83759.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
extracellular solute-binding protein
Displaying 11 items

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