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NECEvent2014_6_5_scaffold_134

Alias: 176_005_scaffold_134

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_134_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124..783)
DNA (660bp) protein (220aa)
Conserved domain protein {ECO:0000313|EMBL:EDT27580.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
hypothetical protein
NECEvent2014_6_5_scaffold_134_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1830..2294
DNA (465bp) protein (155aa)
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clost
greA; transcription elongation factor GreA
NECEvent2014_6_5_scaffold_134_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2620..7386)
DNA (4767bp) protein (1589aa)
sialidase-like protein
Sialidase-like protein {ECO:0000313|EMBL:BAB80970.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 /
NECEvent2014_6_5_scaffold_134_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7644..9407
DNA (1764bp) protein (588aa)
Uncharacterized protein {ECO:0000313|EMBL:BAB80971.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein rbh
NECEvent2014_6_5_scaffold_134_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9530..13597)
DNA (4068bp) protein (1356aa)
Beta-galactosidase {ECO:0000313|EMBL:EDT72972.1}; EC=3.2.1.23 {ECO:0000313|EMBL:EDT72972.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
beta-galactosidase
NECEvent2014_6_5_scaffold_134_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13847..15181)
DNA (1335bp) protein (445aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80973.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_134_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15318..17036)
DNA (1719bp) protein (573aa)
Adenine deaminase {ECO:0000255|HAMAP-Rule:MF_01518}; Short=Adenase {ECO:0000255|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000255|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000255|HAMAP-Rule:MF_0
adeC; adenine deaminase
NECEvent2014_6_5_scaffold_134_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17052..18098)
DNA (1047bp) protein (349aa)
spermidine/putrescine-binding protein 1
Probable spermidine/putrescine-binding protein 1 {ECO:0000313|EMBL:BAB80975.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
NECEvent2014_6_5_scaffold_134_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18138..19169)
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15652.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
ABC transporter ATP-binding protein
NECEvent2014_6_5_scaffold_134_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19205..19987)
DNA (783bp) protein (261aa)
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EDT27558.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
NECEvent2014_6_5_scaffold_134_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19989..20819)
DNA (831bp) protein (277aa)
ABC transporter, permease protein {ECO:0000313|EMBL:EDT27641.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
ABC transporter permease
NECEvent2014_6_5_scaffold_134_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21207..22355)
DNA (1149bp) protein (383aa)
lysine-N-methylase
Probable lysine-N-methylase {ECO:0000313|EMBL:BAB80980.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain
NECEvent2014_6_5_scaffold_134_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22554..23519)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
dihydrouridine synthase
NECEvent2014_6_5_scaffold_134_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23623..24993)
DNA (1371bp) protein (457aa)
MATE efflux family protein {ECO:0000313|EMBL:EDT24355.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. A
hypothetical protein
NECEvent2014_6_5_scaffold_134_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25346..25687)
DNA (342bp) protein (114aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17177.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_134_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25699..27615)
DNA (1917bp) protein (639aa)
OPT family oligopeptide transporter
Uncharacterized protein {ECO:0000313|EMBL:BAB80984.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_134_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28262..31780)
DNA (3519bp) protein (1173aa)
Putative hyaluronoglucosaminidase {ECO:0000313|EMBL:EIA17179.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
hyaluronoglucosaminidase
NECEvent2014_6_5_scaffold_134_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32012..32164)
DNA (153bp) protein (51aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24370.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_6_5_scaffold_134_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32432..37495)
DNA (5064bp) protein (1688aa)
Uncharacterized protein {ECO:0000313|EMBL:BAB80987.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein rbh
NECEvent2014_6_5_scaffold_134_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37944..39332)
DNA (1389bp) protein (463aa)
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:BAB80988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_6_5_scaffold_134_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39751..40500
DNA (750bp) protein (250aa)
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80989.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_5_scaffold_134_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40618..41799)
DNA (1182bp) protein (394aa)
pyrimidine nucleoside transporter
Nucleoside transporter, NupC family {ECO:0000313|EMBL:EDT13794.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_5_scaffold_134_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42184..44082)
DNA (1899bp) protein (633aa)
Putative integral inner membrane protein {ECO:0000313|EMBL:EIA17185.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
hypothetical protein
NECEvent2014_6_5_scaffold_134_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44128..44553)
DNA (426bp) protein (142aa)
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABG86925.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_6_5_scaffold_134_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44673..45770)
DNA (1098bp) protein (366aa)
S41 family peptidase {ECO:0000313|EMBL:EIA17187.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
S41 family peptidase
NECEvent2014_6_5_scaffold_134_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46184..46636
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS79418.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_134_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46735..48657)
DNA (1923bp) protein (641aa)
NADH oxidase {ECO:0000313|EMBL:EDT72999.1}; EC=1.-.-.- {ECO:0000313|EMBL:EDT72999.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NADH:flavin oxidoreductases, Old Yellow Enzyme family
NECEvent2014_6_5_scaffold_134_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48673..49434)
DNA (762bp) protein (254aa)
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EIA17190.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
hypothetical protein
NECEvent2014_6_5_scaffold_134_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49461..50825)
DNA (1365bp) protein (455aa)
Glucuronide permease {ECO:0000313|EMBL:EDT13782.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987
sugar (Glycoside-Pentoside-Hexuronide) transporter
NECEvent2014_6_5_scaffold_134_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51042..51458
DNA (417bp) protein (139aa)
AraC-type sugar metabolism regulator {ECO:0000313|EMBL:EIA17192.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
Displaying 30 items

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