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NECEvent2014_6_5_scaffold_160

Alias: 176_005_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_160_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138..266)
DNA (129bp) protein (43aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86511.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_5_scaffold_160_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(419..979)
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT22608.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_6_5_scaffold_160_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1063..2013)
DNA (951bp) protein (317aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
rnz; ribonuclease Z (EC:3.1.26.11)
NECEvent2014_6_5_scaffold_160_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2126..6601)
DNA (4476bp) protein (1492aa)
Glycosyl hydrolase, family 20 {ECO:0000313|EMBL:EDT25857.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE s
hypothetical protein
NECEvent2014_6_5_scaffold_160_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6646..7401
DNA (756bp) protein (252aa)
TrkA domain-containing protein
TrkA domain-containing protein {ECO:0000313|EMBL:EIA17051.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_6_5_scaffold_160_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7454..8206)
DNA (753bp) protein (251aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17052.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_160_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8471..9007)
DNA (537bp) protein (179aa)
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT13730.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_6_5_scaffold_160_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9316..10095
DNA (780bp) protein (260aa)
HisJ family histidinol phosphate phosphatase
HisJ family histidinol phosphate phosphatase {ECO:0000313|EMBL:EIA17056.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_6_5_scaffold_160_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10446..11759
DNA (1314bp) protein (438aa)
sodium:neurotransmitter symporter family protein
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
NECEvent2014_6_5_scaffold_160_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12050..12745
DNA (696bp) protein (232aa)
proton-coupled thiamine transporter YuaJ
Probable proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:EDS81484.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_6_5_scaffold_160_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12854..13930
DNA (1077bp) protein (359aa)
Aminotransferase family protein {ECO:0000313|EMBL:EIA17059.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F26
aminotransferase family protein
NECEvent2014_6_5_scaffold_160_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14066..15112)
DNA (1047bp) protein (349aa)
Calcium/proton exchanger {ECO:0000313|EMBL:EDT22607.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
cax; calcium/proton exchanger
NECEvent2014_6_5_scaffold_160_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15552..16835)
DNA (1284bp) protein (428aa)
phosphodiesterase/nucleotide pyrophosphatase
Phosphodiesterase/nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:EDT25491.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_6_5_scaffold_160_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16904..17239)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT70260.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_160_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17378..17791)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA17064.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_5_scaffold_160_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17991..18869)
DNA (879bp) protein (293aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT22604.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_6_5_scaffold_160_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19062..20348)
DNA (1287bp) protein (429aa)
IS605 family transposase OrfB
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDT22585.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B st
NECEvent2014_6_5_scaffold_160_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20451..20705)
DNA (255bp) protein (85aa)
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDT72019.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
resolvase domain-containing protein
NECEvent2014_6_5_scaffold_160_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20927..21718)
DNA (792bp) protein (264aa)
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EDT25484.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
D-alanyl-D-alanine carboxypeptidase
NECEvent2014_6_5_scaffold_160_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21988..22314)
DNA (327bp) protein (109aa)
Conserved domain protein {ECO:0000313|EMBL:EDT22588.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
hypothetical protein
NECEvent2014_6_5_scaffold_160_trna_1
unknown

Not on your lists

comp(22521..22604)
DNA (84bp)
transferRNA
NECEvent2014_6_5_scaffold_160_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22799..23740
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT13557.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_160_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23778..24647)
DNA (870bp) protein (290aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
NECEvent2014_6_5_scaffold_160_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24837..24938)
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA17070.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_160_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24995..25591)
DNA (597bp) protein (199aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81089.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_160_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25693..26616
DNA (924bp) protein (308aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81090.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_160_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26756..27325)
DNA (570bp) protein (190aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81091.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_160_27
unknown

Not on your lists

comp(27521..27724)
DNA (204bp) protein (68aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_160_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27690..27905)
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25473.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_5_scaffold_160_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27941..28423)
DNA (483bp) protein (161aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22169.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
Displaying items 1-30 of 44 in total

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