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NECEvent2014_6_5_scaffold_172

Alias: 176_005_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_172_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81542.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_172_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(247..696)
DNA (450bp) protein (150aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16686.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_172_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(656..1273)
DNA (618bp) protein (206aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16687.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_172_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1242..1652)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA16688.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_5_scaffold_172_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1639..1899)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT26296.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_6_5_scaffold_172_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2064..2576)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA16690.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_5_scaffold_172_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2566..3024)
DNA (459bp) protein (153aa)
Prepilin peptidase-dependent {ECO:0000313|EMBL:EIA16691.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
prepilin peptidase-dependent
NECEvent2014_6_5_scaffold_172_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3017..4036)
DNA (1020bp) protein (340aa)
Putative pilus biogenesis protein {ECO:0000313|EMBL:EIA16692.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
pilus biogenesis protein
NECEvent2014_6_5_scaffold_172_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4023..5411)
DNA (1389bp) protein (463aa)
tapB; type IV pilus assembly protein rbh
Probable type IV pilus assembly protein {ECO:0000313|EMBL:BAB81550.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_6_5_scaffold_172_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5586..6701)
DNA (1116bp) protein (372aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EDS79015.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
putative IS transposase (OrfB)
NECEvent2014_6_5_scaffold_172_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6679..7305)
DNA (627bp) protein (209aa)
Transposon, resolvase {ECO:0000313|EMBL:EES90966.1}; TaxID=592027 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 1873.;"
transposon, resolvase
NECEvent2014_6_5_scaffold_172_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7488..8519)
DNA (1032bp) protein (344aa)
Putative lipoprotein {ECO:0000313|EMBL:EDS80163.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495
hypothetical protein
NECEvent2014_6_5_scaffold_172_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8536..9354)
DNA (819bp) protein (273aa)
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; TaxID=195102 species="Bacteria; Firm
dapF; diaminopimelate epimerase
NECEvent2014_6_5_scaffold_172_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9446..11173
DNA (1728bp) protein (576aa)
Probable fibronectin-binding protein {ECO:0000313|EMBL:BAB81553.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
fibronectin-binding protein
NECEvent2014_6_5_scaffold_172_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11283..12410)
DNA (1128bp) protein (376aa)
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81554.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_172_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12430..12966)
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_6_5_scaffold_172_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12970..13890)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
RluA family pseudouridine synthase
NECEvent2014_6_5_scaffold_172_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14028..14654)
DNA (627bp) protein (209aa)
cell division protein DivIVA
Cell-division initiation protein DivIVA {ECO:0000313|EMBL:EIA16700.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_6_5_scaffold_172_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14667..15428)
DNA (762bp) protein (254aa)
S4 domain-containing protein
S4 domain-containing protein {ECO:0000313|EMBL:EIA16701.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
NECEvent2014_6_5_scaffold_172_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15430..15879)
DNA (450bp) protein (150aa)
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_6_5_scaffold_172_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15898..16557)
DNA (660bp) protein (220aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_5_scaffold_172_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16657..17388)
DNA (732bp) protein (244aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15079.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_5_scaffold_172_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17401..17739)
DNA (339bp) protein (113aa)
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT25558.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
NECEvent2014_6_5_scaffold_172_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17752..18468)
DNA (717bp) protein (239aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_172_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18482..19228)
DNA (747bp) protein (249aa)
Cell division protein FtsQ {ECO:0000313|EMBL:EDT25556.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
cell division protein FtsQ
NECEvent2014_6_5_scaffold_172_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19386..20510)
DNA (1125bp) protein (375aa)
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_6_5_scaffold_172_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20538..21509)
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
NECEvent2014_6_5_scaffold_172_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21559..22920)
DNA (1362bp) protein (454aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10) rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostr
NECEvent2014_6_5_scaffold_172_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22933..24387)
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
NECEvent2014_6_5_scaffold_172_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24482..26701)
DNA (2220bp) protein (740aa)
Stage V sporulation protein D {ECO:0000313|EMBL:EDT23323.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str
spoVD; stage V sporulation protein D
Displaying items 1-30 of 43 in total

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