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NECEvent2014_6_5_scaffold_341

Alias: 176_005_scaffold_341

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_341_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..193)
DNA (192bp) protein (64aa)
rhoptry protein
Putative rhoptry protein {ECO:0000313|EMBL:ACA53723.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch
NECEvent2014_6_5_scaffold_341_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(204..848)
DNA (645bp) protein (215aa)
transcriptional regulator, MerR family protein
Transcriptional regulator, MerR family protein {ECO:0000313|EMBL:ACA56618.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_5_scaffold_341_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1231..2499)
DNA (1269bp) protein (423aa)
Uncharacterized protein {ECO:0000313|EMBL:EOC99339.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
NECEvent2014_6_5_scaffold_341_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2748..3221
DNA (474bp) protein (158aa)
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT70942.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_6_5_scaffold_341_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3475..4701
DNA (1227bp) protein (409aa)
Multidrug resistance protein {ECO:0000313|EMBL:EDT70935.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str.
multidrug resistance protein
NECEvent2014_6_5_scaffold_341_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4801..5616)
DNA (816bp) protein (272aa)
Conserved domain protein {ECO:0000313|EMBL:EDT70959.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS
hypothetical protein
NECEvent2014_6_5_scaffold_341_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5919..6230
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT23066.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_6_5_scaffold_341_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6622..7896)
DNA (1275bp) protein (425aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT16196.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
acetyltransferase
NECEvent2014_6_5_scaffold_341_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8111..10423)
DNA (2313bp) protein (771aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56872.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_5_scaffold_341_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10513..11352)
DNA (840bp) protein (280aa)
Uncharacterised protein {ECO:0000313|EMBL:CEO33231.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
NECEvent2014_6_5_scaffold_341_11
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11394..13364)
DNA (1971bp) protein (657aa)
Uncharacterized protein {ECO:0000313|EMBL:AJI14237.1}; TaxID=451709 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus 03BB108.
hypothetical protein
NECEvent2014_6_5_scaffold_341_12
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13382..13861)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ87382.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_6_5_scaffold_341_13
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13854..14213)
DNA (360bp) protein (120aa)
SIR2-like domain protein
Uncharacterized protein {ECO:0000313|EMBL:KEZ87383.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_6_5_scaffold_341_14
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14264..15121)
DNA (858bp) protein (286aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52021.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_6_5_scaffold_341_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15495..15725)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT16139.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_341_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16167..16397)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT16123.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_341_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16470..16607)
DNA (138bp) protein (46aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS79116.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_6_5_scaffold_341_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16934..17848)
DNA (915bp) protein (305aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17656.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_341_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18225..18824
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA17654.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
transposase
NECEvent2014_6_5_scaffold_341_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19047..19640)
DNA (594bp) protein (198aa)
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDT23046.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
RNA polymerase sigma factor
NECEvent2014_6_5_scaffold_341_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20160..23063)
DNA (2904bp) protein (968aa)
Putative phage {ECO:0000313|EMBL:EDS79109.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
primase
NECEvent2014_6_5_scaffold_341_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23189..25117)
DNA (1929bp) protein (643aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EDS79086.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str.
polA; DNA polymerase i
NECEvent2014_6_5_scaffold_341_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26517..27059
DNA (543bp) protein (181aa)
DNA-binding protein {ECO:0000313|EMBL:EDT16068.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.
DNA-binding protein
NECEvent2014_6_5_scaffold_341_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27166..27429
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70945.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
Displaying 24 items

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