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NECEvent2014_6_5_scaffold_350

Alias: 176_005_scaffold_350

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_350_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(214..1014)
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
NECEvent2014_6_5_scaffold_350_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1192..2526)
DNA (1335bp) protein (445aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:EDS80507.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS80507.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_5_scaffold_350_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2942..4840)
DNA (1899bp) protein (633aa)
ATP-dependent protease {ECO:0000313|EMBL:EIA15768.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP-dependent protease
NECEvent2014_6_5_scaffold_350_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4856..5302)
DNA (447bp) protein (149aa)
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_6_5_scaffold_350_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5304..7262)
DNA (1959bp) protein (653aa)
DHH family protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82343.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_350_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7295..8290)
DNA (996bp) protein (332aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82344.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_350_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8308..8625)
DNA (318bp) protein (106aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80479.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_6_5_scaffold_350_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8908..9150)
DNA (243bp) protein (81aa)
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_6_5_scaffold_350_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9181..9633)
DNA (453bp) protein (151aa)
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=289380 species="Bacteria; Firmicutes; Clostrid
NECEvent2014_6_5_scaffold_350_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9647..9934)
DNA (288bp) protein (96aa)
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_6_5_scaffold_350_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10078..10290)
DNA (213bp) protein (71aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70820.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_6_5_scaffold_350_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10327..11187)
DNA (861bp) protein (287aa)
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_6_5_scaffold_350_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11220..11453)
DNA (234bp) protein (78aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_350_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11613..12329
DNA (717bp) protein (239aa)
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_6_5_scaffold_350_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12272..13432
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein {ECO:0000313|EMBL:EDT13620.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
nifS; cysteine desulfurase
NECEvent2014_6_5_scaffold_350_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13444..14508
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EDT22635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
sporulation integral membrane protein YtvI
NECEvent2014_6_5_scaffold_350_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14558..15148
DNA (591bp) protein (197aa)
yyaC; sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:EIA15782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
NECEvent2014_6_5_scaffold_350_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15298..15795)
DNA (498bp) protein (166aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25916.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_5_scaffold_350_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15844..16704)
DNA (861bp) protein (287aa)
stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:EDT22649.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str
NECEvent2014_6_5_scaffold_350_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16705..17478)
DNA (774bp) protein (258aa)
soj; sporulation initiation inhibitor protein soj
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:EDT13616.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_6_5_scaffold_350_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17728..18447)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
gidB; 16S rRNA methyltransferase GidB
NECEvent2014_6_5_scaffold_350_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18624..20516)
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=488537 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
NECEvent2014_6_5_scaffold_350_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20531..21907)
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
trmE; tRNA modification GTPase TrmE
NECEvent2014_6_5_scaffold_350_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22249..22872)
DNA (624bp) protein (208aa)
R3H domain protein {ECO:0000313|EMBL:EDT22613.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626
jag; SpoIIIJ-associated protein
NECEvent2014_6_5_scaffold_350_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22914..23630)
DNA (717bp) protein (239aa)
oxaA; inner membrane protein translocase component YidC
Membrane protein OxaA {ECO:0000313|EMBL:EDT22646.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3
NECEvent2014_6_5_scaffold_350_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23664..23873)
DNA (210bp) protein (70aa)
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_6_5_scaffold_350_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23845..24222)
DNA (378bp) protein (126aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
NECEvent2014_6_5_scaffold_350_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24283..24417)
DNA (135bp) protein (45aa)
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_6_5_scaffold_350_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25448..26821
DNA (1374bp) protein (458aa)
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Displaying 29 items

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