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NECEvent2014_6_5_scaffold_406

Alias: 176_005_scaffold_406

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_406_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25..2676)
DNA (2652bp) protein (884aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EDT27884.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EDT27884.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
copper-translocating P-type ATPase
NECEvent2014_6_5_scaffold_406_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2977..3633
DNA (657bp) protein (219aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
flavodoxin family protein
NECEvent2014_6_5_scaffold_406_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4917..6053
DNA (1137bp) protein (379aa)
glycine betaine/L-proline transport, ATP-binding protein
Glycine betaine/L-proline transport, ATP-binding protein {ECO:0000313|EMBL:EDT16625.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_6_5_scaffold_406_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6046..7599
DNA (1554bp) protein (518aa)
glycine betaine/L-proline ABC transporter permease/glycine betaine/L-proline-binding protein
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein {ECO:0000313|EMBL:EDT25088.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
NECEvent2014_6_5_scaffold_406_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7813..8433
DNA (621bp) protein (207aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EIA18290.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_6_5_scaffold_406_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8426..9517
DNA (1092bp) protein (364aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80266.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_406_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9865..11286
DNA (1422bp) protein (474aa)
PTS system transporter
PTS system {ECO:0000313|EMBL:BAB80267.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_6_5_scaffold_406_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11490..13157
DNA (1668bp) protein (556aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDT26177.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDT26177.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
alpha-glucosidase
NECEvent2014_6_5_scaffold_406_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13422..14129
DNA (708bp) protein (236aa)
treR; transcriptional regulator rbh
Trehalose operon repressor {ECO:0000313|EMBL:EDT26193.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_6_5_scaffold_406_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14774..16939)
DNA (2166bp) protein (722aa)
Stage V sporulation protein D {ECO:0000313|EMBL:EIA18296.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
spoVD; stage V sporulation protein D
NECEvent2014_6_5_scaffold_406_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17303..17971
DNA (669bp) protein (223aa)
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT70513.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_6_5_scaffold_406_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18553..19638
DNA (1086bp) protein (362aa)
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
ribB; riboflavin biosynthesis protein RibD
NECEvent2014_6_5_scaffold_406_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19657..20310
DNA (654bp) protein (218aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EIA18299.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EIA18299.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
risA; riboflavin synthase subunit alpha (EC:2.5.1.9)
NECEvent2014_6_5_scaffold_406_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20463..21662
DNA (1200bp) protein (400aa)
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
ribA; riboflavin biosynthesis protein RibA
NECEvent2014_6_5_scaffold_406_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21757..22239
DNA (483bp) protein (161aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase
NECEvent2014_6_5_scaffold_406_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22366..23358)
DNA (993bp) protein (331aa)
cell wall binding repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80276.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_406_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23462..23869)
DNA (408bp) protein (136aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 17 items

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