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NECEvent2014_6_5_scaffold_412

Alias: 176_005_scaffold_412

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_412_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1027
DNA (1026bp) protein (342aa)
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT25540.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_6_5_scaffold_412_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1145..1984)
DNA (840bp) protein (280aa)
patatin family phospholipase
Patatin family phospholipase {ECO:0000313|EMBL:EIA17113.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
NECEvent2014_6_5_scaffold_412_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2292..3086
DNA (795bp) protein (265aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EIA17112.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
thiD; phosphomethylpyrimidine kinase
NECEvent2014_6_5_scaffold_412_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3098..3895
DNA (798bp) protein (266aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
NECEvent2014_6_5_scaffold_412_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3888..4511
DNA (624bp) protein (208aa)
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF
thiE; thiamine-phosphate pyrophosphorylase rbh
NECEvent2014_6_5_scaffold_412_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4741..6519
DNA (1779bp) protein (593aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EDS81794.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS81794.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
NECEvent2014_6_5_scaffold_412_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6609..8531
DNA (1923bp) protein (641aa)
prkA; serine protein kinase (EC:2.7.11.1)
Serine protein kinase {ECO:0000313|EMBL:EDT22267.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3
NECEvent2014_6_5_scaffold_412_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8535..9722
DNA (1188bp) protein (396aa)
yhbH; hypothetical protein
UPF0229 protein CPF_1540 {ECO:0000255|HAMAP-Rule:MF_01232}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_6_5_scaffold_412_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9740..11089
DNA (1350bp) protein (450aa)
spoVR; stage V sporulation protein R
Stage V sporulation protein R {ECO:0000313|EMBL:BAB81038.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_6_5_scaffold_412_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11141..11677
DNA (537bp) protein (179aa)
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABG87435.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A
NECEvent2014_6_5_scaffold_412_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11699..12049
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13406.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_5_scaffold_412_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12096..12617)
DNA (522bp) protein (174aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EDT13401.1}; EC=2.7.8.8 {ECO:0000313|EMBL:EDT13401.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
NECEvent2014_6_5_scaffold_412_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12932..13813
DNA (882bp) protein (294aa)
lipid kinase
Diacylglycerol kinase catalytic domain protein {ECO:0000313|EMBL:ABG87295.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_5_scaffold_412_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13886..14566
DNA (681bp) protein (227aa)
Putative membrane protein {ECO:0000313|EMBL:EDT70026.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JG
hypothetical protein
NECEvent2014_6_5_scaffold_412_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14735..15427)
DNA (693bp) protein (231aa)
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT25547.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
amino acid ABC transporter rbh
NECEvent2014_6_5_scaffold_412_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15439..16080)
DNA (642bp) protein (214aa)
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EDT70025.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
His/Glu/Gln/Arg/opine ABC transporter permease
NECEvent2014_6_5_scaffold_412_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16094..16882)
DNA (789bp) protein (263aa)
Amino acid ABC transporter (Binding protein) {ECO:0000313|EMBL:EIA17229.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
amino acid ABC transporter (binding protein)
NECEvent2014_6_5_scaffold_412_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17222..18493
DNA (1272bp) protein (424aa)
hypothetical protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA17228.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_6_5_scaffold_412_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18832..19734
DNA (903bp) protein (301aa)
cysK; cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_6_5_scaffold_412_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19753..20262
DNA (510bp) protein (170aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
NECEvent2014_6_5_scaffold_412_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20407..21399
DNA (993bp) protein (331aa)
iron-sulfur cluster-binding protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81026.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_412_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21437..22141
DNA (705bp) protein (235aa)
plsD; sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase family protein {ECO:0000313|EMBL:EIA17224.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_6_5_scaffold_412_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22153..22782
DNA (630bp) protein (210aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
NECEvent2014_6_5_scaffold_412_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22812..23675)
DNA (864bp) protein (288aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17222.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 24 items

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