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NECEvent2014_6_5_scaffold_545

Alias: 176_005_scaffold_545

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_545_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41..709
DNA (669bp) protein (223aa)
Nitroreductase family protein {ECO:0000313|EMBL:EDT72436.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str
nitroreductase
NECEvent2014_6_5_scaffold_545_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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995..1660
DNA (666bp) protein (222aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=451
NECEvent2014_6_5_scaffold_545_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1697..2563
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase {ECO:0000256|HAMAP-Rule:MF_01237, ECO:0000256|SAAS:SAAS00021647}; Short=NAL {ECO:0000256|HAMAP-Rule:MF_01237};; Short=Neu5Ac lyase {ECO:0000256|HAMAP-Rule:MF_01237};; EC=4.1.
NECEvent2014_6_5_scaffold_545_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2667..4184
DNA (1518bp) protein (506aa)
sodium/solute symporter family protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:EIA18624.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_6_5_scaffold_545_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4295..4747
DNA (453bp) protein (151aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15485.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_5_scaffold_545_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4903..5790
DNA (888bp) protein (296aa)
ROK family protein
ROK family protein {ECO:0000313|EMBL:EDT23909.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626
NECEvent2014_6_5_scaffold_545_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5981..6820
DNA (840bp) protein (280aa)
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_6_5_scaffold_545_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7007..7441)
DNA (435bp) protein (145aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18628.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_545_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7659..12545
DNA (4887bp) protein (1629aa)
Hyaluronidase {ECO:0000313|EMBL:EDT23880.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDT23880.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
nagH; hyaluronidase (EC:3.2.1.35)
NECEvent2014_6_5_scaffold_545_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13424..14167
DNA (744bp) protein (248aa)
cbiM; cobalt transport protein CbiM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=
NECEvent2014_6_5_scaffold_545_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14167..14478
DNA (312bp) protein (104aa)
cbiN; cobalt transport protein CbiN
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=451755 species="Bac
NECEvent2014_6_5_scaffold_545_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14462..15232
DNA (771bp) protein (257aa)
cbiQ; cobalt ABC transporter permease CbiQ
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EDT23918.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_6_5_scaffold_545_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15247..16104
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
cbiO; cobalt transporter ATP-binding subunit
NECEvent2014_6_5_scaffold_545_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16566..18149
DNA (1584bp) protein (528aa)
Pts system maltose-specific eiicb component {ECO:0000313|EMBL:EDT15519.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT15519.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
ptiB; PTS system arbutin-like transporter subunit IIBC
Displaying 14 items

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