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NECEvent2014_6_5_scaffold_646

Alias: 176_005_scaffold_646

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_646_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..678
DNA (678bp) protein (226aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23964.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_6_5_scaffold_646_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

654..1313
DNA (660bp) protein (220aa)
ComF protein, homolog {ECO:0000313|EMBL:EDT15630.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
competence protein FC
NECEvent2014_6_5_scaffold_646_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1765..2304
DNA (540bp) protein (180aa)
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_5_scaffold_646_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2540..5062
DNA (2523bp) protein (841aa)
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_5_scaffold_646_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5317..5439
DNA (123bp) protein (41aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
NECEvent2014_6_5_scaffold_646_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5441..6412
DNA (972bp) protein (324aa)
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_6_5_scaffold_646_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6660..8003)
DNA (1344bp) protein (448aa)
Peptidase family protein {ECO:0000313|EMBL:EDT23961.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
peptidase
NECEvent2014_6_5_scaffold_646_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8115..10277
DNA (2163bp) protein (721aa)
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:EDT23977.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
NECEvent2014_6_5_scaffold_646_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10624..11220
DNA (597bp) protein (199aa)
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
NECEvent2014_6_5_scaffold_646_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11314..11760)
DNA (447bp) protein (149aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EDT23981.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EDT23981.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_6_5_scaffold_646_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11760..12464)
DNA (705bp) protein (235aa)
glycoprotease
Glycoprotease family protein {ECO:0000313|EMBL:EDT23976.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_6_5_scaffold_646_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12458..12922)
DNA (465bp) protein (155aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73307.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_6_5_scaffold_646_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13197..13994
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ91721.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_6_5_scaffold_646_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14132..15352)
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ91725.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sodium:dicarboxylate symporter family protein
Displaying 14 items

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