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NECEvent2014_6_5_scaffold_657

Alias: 176_005_scaffold_657

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_657_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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118..2352
DNA (2235bp) protein (745aa)
pfl; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase {ECO:0000313|EMBL:EDS81348.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDS81348.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
NECEvent2014_6_5_scaffold_657_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2639..3346
DNA (708bp) protein (236aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_6_5_scaffold_657_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3608..6340
DNA (2733bp) protein (911aa)
DNA mismatch repair protein MutS {ECO:0000255|HAMAP-Rule:MF_00096}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
mutS; DNA mismatch repair protein MutS
NECEvent2014_6_5_scaffold_657_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6367..8391
DNA (2025bp) protein (675aa)
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
mutL; DNA mismatch repair protein
NECEvent2014_6_5_scaffold_657_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8409..9341
DNA (933bp) protein (311aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
NECEvent2014_6_5_scaffold_657_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9385..9627
DNA (243bp) protein (81aa)
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_6_5_scaffold_657_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9732..11012
DNA (1281bp) protein (427aa)
aluminum resistance protein
Aluminum resistance protein {ECO:0000313|EMBL:EDT25778.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str
NECEvent2014_6_5_scaffold_657_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11271..12176
DNA (906bp) protein (302aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25785.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_5_scaffold_657_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12356..12967)
DNA (612bp) protein (204aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=451754 species="Bacteria; Firmicu
NECEvent2014_6_5_scaffold_657_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13176..13568
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_657_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13659..15011)
DNA (1353bp) protein (451aa)
xerC; site-specific tyrosine recombinase XerC
Probable integrase/recombinase {ECO:0000313|EMBL:BAB80869.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
Displaying 11 items

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