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NECEvent2014_6_5_scaffold_680

Alias: 176_005_scaffold_680

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_680_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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62..328
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18695.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_680_trna_1
unknown

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437..524
DNA (88bp)
transferRNA
NECEvent2014_6_5_scaffold_680_trna_2
unknown

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533..620
DNA (88bp)
transferRNA
NECEvent2014_6_5_scaffold_680_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(658..840)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT15044.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_680_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1077..1958
DNA (882bp) protein (294aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT26677.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_6_5_scaffold_680_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2047..2211)
DNA (165bp) protein (55aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26666.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_5_scaffold_680_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2420..5896
DNA (3477bp) protein (1159aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
addB; ATP-dependent nuclease subunit B
NECEvent2014_6_5_scaffold_680_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5886..9701
DNA (3816bp) protein (1272aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
addA; recombination helicase AddA
NECEvent2014_6_5_scaffold_680_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9801..11069)
DNA (1269bp) protein (423aa)
PolyA polymerase family protein {ECO:0000313|EMBL:EDT23633.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B s
polyA polymerase family protein
NECEvent2014_6_5_scaffold_680_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11185..12177
DNA (993bp) protein (331aa)
3'-5' exoribonuclease YhaM {ECO:0000313|EMBL:EDT23589.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. A
CMP-binding factor
NECEvent2014_6_5_scaffold_680_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12209..13369)
DNA (1161bp) protein (387aa)
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDT23627.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_5_scaffold_680_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13561..14781
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:M
pepT; peptidase T (EC:3.4.11.4)
Displaying 12 items

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