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NECEvent2014_6_5_scaffold_682

Alias: 176_005_scaffold_682

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_682_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..536
DNA (534bp) protein (178aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
folA; dihydrofolate reductase
NECEvent2014_6_5_scaffold_682_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

581..697
DNA (117bp) protein (39aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT23611.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_6_5_scaffold_682_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(689..1975)
DNA (1287bp) protein (429aa)
brnQ; branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDT71863.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_6_5_scaffold_682_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2414..2917)
DNA (504bp) protein (168aa)
Putative lipoprotein {ECO:0000313|EMBL:EDT23635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 36
lipoprotein
NECEvent2014_6_5_scaffold_682_trna_1
unknown

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comp(3353..3439)
DNA (87bp)
transferRNA
NECEvent2014_6_5_scaffold_682_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3690..4478)
DNA (789bp) protein (263aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=451756
NECEvent2014_6_5_scaffold_682_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4755..5474)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT23630.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_6_5_scaffold_682_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5487..6380)
DNA (894bp) protein (298aa)
Putative permease {ECO:0000313|EMBL:EDT23629.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.
permease
NECEvent2014_6_5_scaffold_682_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6383..6967)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT23585.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_6_5_scaffold_682_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6987..7913)
DNA (927bp) protein (309aa)
CobW/P47K family protein
CobW/P47K family protein {ECO:0000313|EMBL:EDT26710.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
NECEvent2014_6_5_scaffold_682_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8101..9297)
DNA (1197bp) protein (399aa)
plc; phospholipase C (EC:3.1.4.3)
Phospholipase C; Short=PLC;; EC=3.1.4.3;; Alpha-toxin; Hemolysin; Lecithinase; Phosphatidylcholine cholinephosphohydrolase; Flags: Precursor;; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; C
NECEvent2014_6_5_scaffold_682_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9629..11101
DNA (1473bp) protein (491aa)
UPF0061 protein AC1_0062 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
hypothetical protein
NECEvent2014_6_5_scaffold_682_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11213..11875)
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT26714.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_6_5_scaffold_682_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11985..12350)
DNA (366bp) protein (122aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80592.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_6_5_scaffold_682_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12463..12906)
DNA (444bp) protein (148aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26646.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_5_scaffold_682_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12984..13415)
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
cytidine/deoxycytidylate deaminase
NECEvent2014_6_5_scaffold_682_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13418..14683)
DNA (1266bp) protein (422aa)
hlyA; hemolysin-like protein
Hemolysin-related protein {ECO:0000313|EMBL:EIA18709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 17 items

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