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NECEvent2014_6_5_scaffold_771

Alias: 176_005_scaffold_771

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_771_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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126..695
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDT23625.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
TetR family transcriptional regulator
NECEvent2014_6_5_scaffold_771_trna_1
unknown

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750..821
DNA (72bp)
transferRNA
NECEvent2014_6_5_scaffold_771_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(941..2047)
DNA (1107bp) protein (369aa)
Prophage LambdaBa04, site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDT26701.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
xerD10; site-specific recombinase XerD
NECEvent2014_6_5_scaffold_771_3
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2148..2987)
DNA (840bp) protein (280aa)
DNA-damage-inducible protein D family protein {ECO:0000313|EMBL:CDE43879.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.
dinD; DNA damage-inducible protein D
NECEvent2014_6_5_scaffold_771_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3957..4634)
DNA (678bp) protein (226aa)
Putative helix-turn-helix domain protein {ECO:0000313|EMBL:EDT71814.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
dna-binding protein
NECEvent2014_6_5_scaffold_771_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4707..4955
DNA (249bp) protein (83aa)
Conserved domain protein {ECO:0000313|EMBL:EDT71870.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS
phage transcriptional regulator
NECEvent2014_6_5_scaffold_771_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5165..5566
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT71832.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_771_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5588..6274
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT23584.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_6_5_scaffold_771_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6290..7591
DNA (1302bp) protein (434aa)
Replicative DNA helicase {ECO:0000313|EMBL:EDT71866.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDT71866.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
dnaB; replicative DNA helicase (EC:3.6.1.-)
NECEvent2014_6_5_scaffold_771_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7613..7723
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA16008.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_771_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8011..8322
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT70030.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_6_5_scaffold_771_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8350..8550
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT26662.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_5_scaffold_771_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8543..8686
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA16005.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_771_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8803..9342
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:EIA16004.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_5_scaffold_771_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9826..10443
DNA (618bp) protein (206aa)
Putative reticulocyte-binding protein {ECO:0000313|EMBL:EDT71813.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_6_5_scaffold_771_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10547..10768
DNA (222bp) protein (74aa)
SMC domain protein {ECO:0000313|EMBL:EDT71838.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;
hypothetical protein
NECEvent2014_6_5_scaffold_771_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10755..11039
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT71835.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_6_5_scaffold_771_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11032..11715
DNA (684bp) protein (228aa)
RNA polymerase sigma-F factor {ECO:0000313|EMBL:EIA15997.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
RNA polymerase sigma factor, sigma-70 family
NECEvent2014_6_5_scaffold_771_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11737..12099
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT15006.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_5_scaffold_771_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12145..12537
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT15058.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
RNA polymerase sigma factor
Displaying 20 items

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