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NECEvent2014_6_5_scaffold_778

Alias: 176_005_scaffold_778

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_778_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(77..1408)
DNA (1332bp) protein (444aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT70686.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_6_5_scaffold_778_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1410..1952)
DNA (543bp) protein (181aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EIA17520.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EIA17520.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
ECF subfamily RNA polymerase sigma-24 subunit
NECEvent2014_6_5_scaffold_778_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2350..2577
DNA (228bp) protein (76aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17519.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_778_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2682..3587)
DNA (906bp) protein (302aa)
Sensor histidine kinase {ECO:0000313|EMBL:EDT70682.1}; EC=2.7.3.- {ECO:0000313|EMBL:EDT70682.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
hpkA; sensor histidine kinase (EC:2.7.3.-)
NECEvent2014_6_5_scaffold_778_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3601..4353)
DNA (753bp) protein (251aa)
Putative bacitracin ABC transporter, permease protein {ECO:0000313|EMBL:EDT14360.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
hypothetical protein
NECEvent2014_6_5_scaffold_778_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4346..5266)
DNA (921bp) protein (307aa)
Bacitracin ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT14380.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ABC transporter
NECEvent2014_6_5_scaffold_778_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5476..6165)
DNA (690bp) protein (230aa)
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT14361.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_6_5_scaffold_778_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6509..7816)
DNA (1308bp) protein (436aa)
sodium:dicarboxylate symporter family protein
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:ABG85685.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_6_5_scaffold_778_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8575..9456
DNA (882bp) protein (294aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80652.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_5_scaffold_778_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9712..10368
DNA (657bp) protein (219aa)
pentapeptide repeat-containing protein
Pentapeptide repeat family protein {ECO:0000313|EMBL:ABG85747.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_5_scaffold_778_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10462..11445)
DNA (984bp) protein (328aa)
Putative lysophospholipase {ECO:0000313|EMBL:EDT14399.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. J
lysophospholipase
NECEvent2014_6_5_scaffold_778_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11630..11974
DNA (345bp) protein (115aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17510.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_5_scaffold_778_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11988..12365
DNA (378bp) protein (126aa)
Putative membrane protein {ECO:0000313|EMBL:EDT24480.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
hypothetical protein
Displaying 13 items

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