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NECEvent2014_6_5_scaffold_1828_1

Organism: NECEvent2014_6_5_Clostridium_7_2_43FAA_28_9

near complete RP 48 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 15 / 38 MC: 2
Location: comp(2..229)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 76.0
  • Bit_score: 149
  • Evalue 2.40e-33
sigG; RNA polymerase sigma-G factor SigG similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 74.0
  • Bit_score: 134
  • Evalue 9.30e-30

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 228
ATGAGCTTGATTATTAATAAAGTAGAAATATGTGGAGTGAATACTTCAAAACTACCTATATTAAAAGAAAAAGAAAAAAGAGAGTTACTTTTAAAAATGAGAGACGGAGATAAAGGTGCTAGAGAAACTTTTATTAAAGGTAATTTAAGATTGGTTTTAAGTGTTATACAAAGATTTAATAATAGAGGAGAAAATGTTGATGTCTTATTCCAAGTTGGATGCATAGGA
PROTEIN sequence
Length: 76
MSLIINKVEICGVNTSKLPILKEKEKRELLLKMRDGDKGARETFIKGNLRLVLSVIQRFNNRGENVDVLFQVGCIG