ggKbase home page

NECEvent2014_6_6_Clostridiales_50_23_scaffold_90

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_1
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..497
DNA (495bp) protein (165aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CBK80243.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CBK80243.1};; EC=1.1.1.35 {ECO:0000313|EMBL:CBK80243.1};; TaxID=717962 species="Bacteria; Firmicutes; Clos
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Coprococcus catus GD/7 RepID=D4J7C2_9FIRM
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_2
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

571..1080
DNA (510bp) protein (170aa)
CBS-domain-containing membrane protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9THF7_9CYAN
hypothetical protein
CBS-domain-containing membrane protein {ECO:0000313|EMBL:AFY81459.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acumina
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_3
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

1261..1449
DNA (189bp) protein (63aa)
Toxin-antitoxin system, toxin component, HicA family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GMY5_9FUSO
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EEY34545.1}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichi
putative phage protein-related protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_4
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1490..1906
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XD53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14550.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2052..2873)
DNA (822bp) protein (274aa)
ABC 3 transport family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AJ70_9CLOT
ABC 3 transport family protein {ECO:0000313|EMBL:ERI65899.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2870..3550)
DNA (681bp) protein (227aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC-type Mn/Zn transport systems ATPase component n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6X4_9FIRM
ABC-type Mn/Zn transport systems ATPase component {ECO:0000313|EMBL:CDB29301.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_7
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3619..4800)
DNA (1182bp) protein (394aa)
Periplasmic solute-binding family protein n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PQF4_9FIRM
Periplasmic solute-binding family protein {ECO:0000313|EMBL:EGV09778.1}; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. o
ABC-type metal ion transport system, periplasmic component/surface adhesin
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_8
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4811..5233)
DNA (423bp) protein (141aa)
Transcriptional regulator Fur family n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UZ22_9FIRM
Transcriptional regulator Fur family {ECO:0000313|EMBL:CCZ83553.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" sour
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5579..6511
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Cl rbh
Thioredoxin reductase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RFT7_MOOTA rbh
thioredoxin reductase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_10
unknown

Not on your lists

6508..6618
DNA (111bp) protein (37aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_11
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6687..6872
DNA (186bp) protein (62aa)
Rubredoxin n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BV21_DESAD
rubredoxin-type Fe(Cys)4 protein Tax=CG_Syntroph_02
rubredoxin-type Fe(Cys)4 protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_12
unknown

Not on your lists

7188..7355
DNA (168bp) protein (56aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_90_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7884..8360
DNA (477bp) protein (159aa)
Gram-positive signal peptide protein, YSIRK family (Fragment) n=1 Tax=Eremococcus coleocola ACS-139-V-Col8 RepID=E4KRG3_9LACT
Uncharacterized protein {ECO:0000313|EMBL:KGF10783.1}; Flags: Fragment;; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clos
Displaying 13 items

View Taxonomy