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NECEvent2014_6_6_Clostridiales_50_23_scaffold_110

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_2
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(450..1118)
DNA (669bp) protein (223aa)
Short C-terminal domain protein n=1 Tax=Clostridium difficile CD113 RepID=T4Y9F8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN66572.1}; TaxID=457403 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_3
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1138..2202)
DNA (1065bp) protein (355aa)
Transcriptional regulator n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5ML23_9BACL
Transcriptional regulator {ECO:0000313|EMBL:ELK38992.1}; TaxID=1246477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
putative phage repressor
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_4
unknown

Not on your lists

2419..2616
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_5
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2710..3468
DNA (759bp) protein (253aa)
Prophage LambdaSa1, antirepressor n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SAD3_9BACL
Prophage LambdaSa1, antirepressor {ECO:0000313|EMBL:EHQ63936.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiform
yoqD; putative DNA-binding protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_6
unknown

Not on your lists

3490..3651
DNA (162bp) protein (54aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_7
unknown

Not on your lists

3636..3857
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_8
unknown

Not on your lists

3826..4011
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_9
unknown

Not on your lists

4024..4293
DNA (270bp) protein (90aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_10
unknown

Not on your lists

4424..4792
DNA (369bp) protein (123aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_11
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4792..5910
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WUY2_ANEAE rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI06490.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneuriniba rbh
phage-like protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_12
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5929..6507
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WD65_ANEAE
Uncharacterized protein {ECO:0000313|EMBL:ERI06489.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneuriniba
phage-like protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_13
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6488..8452
DNA (1965bp) protein (655aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1274524 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus rbh
DNA polymerase (EC:2.7.7.7)
DNA polymerase n=1 Tax=Bacillus sonorensis L12 RepID=M5P7H3_9BACI rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8464..10911
DNA (2448bp) protein (816aa)
Phage related protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GT95_CLOLD rbh
Phage-like protein {ECO:0000313|EMBL:KGM99561.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;" rbh
phage-like protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_15
unknown

Not on your lists

10969..11094
DNA (126bp) protein (42aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_16
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11237..11518
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6ST09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49762.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_17
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11508..12860
DNA (1353bp) protein (451aa)
SWI/SNF chromatin-remodeling complex subunit snf22 n=1 Tax=Bacillus sonorensis L12 RepID=M5P5V2_9BACI rbh
SWI/SNF chromatin-remodeling complex subunit snf22 {ECO:0000313|EMBL:EME75381.1}; TaxID=1274524 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sonorensis rbh
DEAD/DEAH box helicase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_18
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12887..13204
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LDT9_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL17784.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (str
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_19
unknown

Not on your lists

13252..13545
DNA (294bp) protein (98aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_20
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13552..13992
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003738A05
Uncharacterized protein {ECO:0000313|EMBL:GAE89513.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolve
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_21
Streptococcus dysgalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14203..15375
DNA (1173bp) protein (391aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1000589 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.; rbh
DNA (Cytosine-5-)-methyltransferase n=2 Tax=Streptococcus RepID=F5U6I7_STREQ rbh
adenine methyltransferase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_22
Alloiococcus otitis, Alloiococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15395..15838
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Alloiococcus otitis ATCC 51267 RepID=K9EUL0_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EKU92850.1}; TaxID=883081 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alloiococcus.;" source="Alloiococcus otitis ATCC 51267.;
phage terminase small subunit
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_23
Paenibacillus popilliae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15831..17069
DNA (1239bp) protein (413aa)
Phage terminase n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9LBP8_PAEPP rbh
Phage terminase {ECO:0000313|EMBL:GAC43332.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 14706.;" rbh
prophage LambdaCh01, PBSX family terminase large subunit
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_24
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17066..18553
DNA (1488bp) protein (496aa)
Phage portal protein, SPP1 Gp6-like n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X2M9_9FIRM rbh
Phage portal protein, SPP1 Gp6-like {ECO:0000313|EMBL:EHL11099.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacteri rbh
portal protein SPP1
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_25
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

18636..20222
DNA (1587bp) protein (529aa)
Phage protein F-like protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ04_FUSVA
Phage protein F-like protein {ECO:0000313|EMBL:EES64622.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
phage head morphogenesis protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_26
unknown

Not on your lists

20206..20385
DNA (180bp) protein (60aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_27
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20458..20769
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VUC6_9CLOT
YjcQ protein {ECO:0000313|EMBL:EEJ51858.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_110_28
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20928..21347
DNA (420bp) protein (140aa)
Phage minor structural protein GP20 n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HIW0_9FIRM
Phage minor structural protein GP20 {ECO:0000313|EMBL:EJU22568.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacteri
minor structural GP20 protein
Displaying 28 items

View Taxonomy