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NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_12

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 14109..15017

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=3 Tax=Pelosinus fermentans RepID=I8RMM5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 28.6
  • Coverage: 255.0
  • Bit_score: 119
  • Evalue 4.30e-24
LysR substrate-binding protein {ECO:0000313|EMBL:EIW20135.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4 similarity UNIPROT
DB: UniProtKB
  • Identity: 28.6
  • Coverage: 255.0
  • Bit_score: 119
  • Evalue 6.10e-24
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 255.0
  • Bit_score: 116
  • Evalue 1.00e-23

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Taxonomy

Pelosinus fermentans → Pelosinus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 909
ATGAAGATCGAGCAATTGCAATATTTCATTGAAGTTGTTAAAGCAGGCTCAGTAAATGCTGCCAGCAAAAAGGTTTATATTTCTCAACAAAGTCTGAATAAATCATTACATAGCTTAGAAGATGAGCTGGGATTTGATATATTAAATCGTACACGACGAGGTGTTAGTTTAACGAAAGAAGGAGAAGTTGTTTTTAATGCTGCACAAGCGATTGTAGCCCGTTTTGAACAAATGCAAGAGCAGGTGCAGCGCCTAAAGACAGCAAAGAATGATACACTAAAGGGTCGTATGAACATCCATATTTCGCCGATGCTCAGTATTTCAATACTTCCTATGGTCTATGTAGACTATATGCATGCTTATCCTGGGGTGCAAGTGTATTGTCAAGAAAAATACCGAGATGATATTGTTAAAGAGGTTTCTCATCATCCGGGGGATGTGGGATTTGTTTTAGTGCCTAACACGATAGAGGTGTTCTTTAATAATATTCCATCAAATGTTCATATGGAAGAGCTCAACAGCTATCCTATTTTTATGGCAATGTCTCCAAAGCATCCTTTGGCTCACCAGAGATCTCTTTCCGTTCATTCGGTGGCAGAATATCCTTTAATTGTTTATGAAGCAGGTGGATCGAAAGGTATTCATGCCTTTCAAAATATGGGAAATATGCATGTGGTGTTGTCGACTAATAATTATCATATGTGTGAAGAGTTACTACGAGAAGGTCAGACATTAATGTACTCCTATCCTAAATATATTGGAAAACGGGTTTTCTCTGATTTCATACATCTTCCGGTTAATACAAAAGAAGCTCATTTTGAGCTTTATCTTGTTTATAACAAAGAGGCCAGCAATCAGGAAAGACGATTGATAGATAGTTTTAGTGGGATTTTGCAGCAGTATTTATAA
PROTEIN sequence
Length: 303
MKIEQLQYFIEVVKAGSVNAASKKVYISQQSLNKSLHSLEDELGFDILNRTRRGVSLTKEGEVVFNAAQAIVARFEQMQEQVQRLKTAKNDTLKGRMNIHISPMLSISILPMVYVDYMHAYPGVQVYCQEKYRDDIVKEVSHHPGDVGFVLVPNTIEVFFNNIPSNVHMEELNSYPIFMAMSPKHPLAHQRSLSVHSVAEYPLIVYEAGGSKGIHAFQNMGNMHVVLSTNNYHMCEELLREGQTLMYSYPKYIGKRVFSDFIHLPVNTKEAHFELYLVYNKEASNQERRLIDSFSGILQQYL*