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NECEvent2014_6_6_Clostridiales_50_23_scaffold_156

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_1
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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275..631
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Facklamia hominis ACS-120-V-Sch10 RepID=S3YQT4_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EFM25765.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BA
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

624..824
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Facklamia hominis ACS-120-V-Sch10 RepID=S3XJ52_9LACT
HTH-type transcriptional regulator
Transcriptional regulator, HTH-type Tn916-like,CTn1-Orf15 {ECO:0000313|EMBL:CAJ67192.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_3
Actinobaculum sp. oral taxon 183, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1147..3732)
DNA (2586bp) protein (862aa)
Uncharacterized protein n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1R9Y5_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH15332.1}; TaxID=1227261 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum sp. oral taxon 183 str rbh
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_4
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3889..4983
DNA (1095bp) protein (365aa)
glycerol dehydrogenase n=1 Tax=Megamonas rupellensis RepID=UPI00036B8FD5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EHR38396.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815. rbh
glycerol dehydrogenase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_5
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(5073..5483)
DNA (411bp) protein (137aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside diphosphate kinase n=1 Tax=Nonomuraea coxensis RepID=UPI00037CAE61
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_6
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5911..6969
DNA (1059bp) protein (353aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J858_DESRM rbh
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABO51261.1}; Flags: Precursor;; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.; rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_7
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6970..8868
DNA (1899bp) protein (633aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J857_DESRM rbh
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ABO51260.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfoto rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_8
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9153..11666
DNA (2514bp) protein (838aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:AEG58761.1}; EC=2.3.1.54 {ECO:0000313|EMBL:AEG58761.1};; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotom rbh
Formate C-acetyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRK7_DESRL rbh
Formate C-acetyltransferase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_9
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11731..12621
DNA (891bp) protein (297aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:AEG16044.1}; EC=1.97.1.4 {ECO:0000313|EMBL:AEG16044.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoc
Glycyl-radical enzyme activating protein family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM76_DESK7
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_10
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12631..13473
DNA (843bp) protein (281aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4E6_DESDJ
TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AFL98830.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="D
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_11
unknown

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comp(13790..13978)
DNA (189bp) protein (63aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_12
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14109..15017
DNA (909bp) protein (303aa)
LysR substrate-binding protein n=3 Tax=Pelosinus fermentans RepID=I8RMM5_9FIRM
LysR substrate-binding protein {ECO:0000313|EMBL:EIW20135.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4
transcriptional regulator, LysR family
NECEvent2014_6_6_Clostridiales_50_23_scaffold_156_13
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(15192..16283)
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BFT4_9FIRM rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;" rbh
hypothetical protein
Displaying 13 items

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