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NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_1

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1..303)

Top 3 Functional Annotations

Value Algorithm Source
Phage-related protein-like protein n=1 Tax=Gardnerella vaginalis 1400E RepID=I4LSD7_GARVA similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 109.0
  • Bit_score: 77
  • Evalue 1.10e-11
tail tape measure protein, TP901 family similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 102.0
  • Bit_score: 77
  • Evalue 3.00e-12
Phage-related protein {ECO:0000313|EMBL:EFH27636.1}; TaxID=682147 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis AMD.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 102.0
  • Bit_score: 77
  • Evalue 1.50e-11

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Taxonomy

Gardnerella vaginalis → Gardnerella → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGGGCCGAGAACAGCGGTTTGACGCCGTTATCAGGTTGAAAGACCAAGCTAGCGCTCAGCTATCTAGGATTGAAACAAGCCTAAAAAATCATGAAAAAGCTTGGAGTCGAACCGGGCGCAAAATCCAACGGACCTTTAGCGAGGTAAAGTCTGCTGGCGAGAGTCTTACGACTAGATTGACGCTACCCCTGGCAGCTGCAGGCGCCGCAAGTTTTAGCTGGGCGGCCGACCTGGAAGACGCCTTTGGTGCCTCTGAGCAGATTTACGGAAAGCAAGCTAAAACAGTGCAGAAGTGGGCAGGC
PROTEIN sequence
Length: 101
VGREQRFDAVIRLKDQASAQLSRIETSLKNHEKAWSRTGRKIQRTFSEVKSAGESLTTRLTLPLAAAGAASFSWAADLEDAFGASEQIYGKQAKTVQKWAG