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NECEvent2014_6_6_Clostridiales_50_23_scaffold_242

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_1
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..303)
DNA (303bp) protein (101aa)
Phage-related protein-like protein n=1 Tax=Gardnerella vaginalis 1400E RepID=I4LSD7_GARVA
tail tape measure protein, TP901 family
Phage-related protein {ECO:0000313|EMBL:EFH27636.1}; TaxID=682147 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis AMD.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_2
unknown

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comp(306..446)
DNA (141bp) protein (47aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_3
unknown

Not on your lists

comp(464..898)
DNA (435bp) protein (145aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_4
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(909..1340)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J082_9FIRM
putative phage protein XkdM
Uncharacterized protein {ECO:0000313|EMBL:EOS27620.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_5
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1353..2462)
DNA (1110bp) protein (370aa)
Phage-like element pbsx protein XkdK n=1 Tax=Geobacillus sp. (strain Y4.1MC1) RepID=E3IDE2_GEOS0
phage-like element pbsx protein XkdK
Phage-like element pbsx protein XkdK {ECO:0000313|EMBL:ADP73457.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y4.1MC1
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_6
unknown

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comp(2467..2958)
DNA (492bp) protein (164aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_7
unknown

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comp(2982..3437)
DNA (456bp) protein (152aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_8
unknown

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comp(3394..3789)
DNA (396bp) protein (132aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_9
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3786..4076)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8QW96_BACCE
hypothetical protein
Bacillus thuringiensis serovar morrisoni strain HD 600 BG10.Contig244, whole genome shotgun sequence {ECO:0000313|EMBL:KIP28840.1}; TaxID=1441 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacil
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_10
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4076..5254)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J7R1_DESRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO51114.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (str rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_11
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5255..6088)
DNA (834bp) protein (278aa)
Clp protease n=1 Tax=Orenia marismortui RepID=UPI00037183AA
peptidase S14, ClpP
Peptidase S14, ClpP {ECO:0000313|EMBL:ABO51115.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6060..7223)
DNA (1164bp) protein (388aa)
Phage portal protein, HK97 family n=1 Tax=Clostridium botulinum (strain ATCC 19397 / Type A) RepID=A7FXQ8_CLOB1 rbh
HK97 family phage portal protein
Histone H1 {ECO:0000313|EMBL:KIN79904.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7314..8987)
DNA (1674bp) protein (558aa)
Putative phage terminase, large subunit n=1 Tax=Clostridium botulinum (strain ATCC 19397 / Type A) RepID=A7FXQ9_CLOB1 rbh
Terminase {ECO:0000313|EMBL:KIN79905.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" rbh
phage terminase, large subunit
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8980..9306)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UG94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67842.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_15
unknown

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comp(9398..9631)
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_16
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10013..10414)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GLN2_CLOLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK13428.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATC
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_17
unknown

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comp(10422..10619)
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_18
unknown

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comp(10616..10957)
DNA (342bp) protein (114aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10954..11382)
DNA (429bp) protein (143aa)
Endodeoxyribonuclease RusA n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY68_9FIRM
Endodeoxyribonuclease RusA {ECO:0000313|EMBL:CDB42843.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Rumino
endodeoxyribonuclease RusA
NECEvent2014_6_6_Clostridiales_50_23_scaffold_242_20
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11742..13493)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MWH1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDF04910.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megas rbh
primase 2
Displaying 20 items

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