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NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_14

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 9109..9963

Top 3 Functional Annotations

Value Algorithm Source
Ribosome biogenesis GTPase A n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9T181_PAEAL similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 287.0
  • Bit_score: 291
  • Evalue 1.00e-75
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 287.0
  • Bit_score: 292
  • Evalue 6.50e-76
rbgA; ribosomal biogenesis GTPase A similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 283.0
  • Bit_score: 282
  • Evalue 1.80e-73

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Taxonomy

Paenibacillus sp. TCA20 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGTATACAGTGGTTTCCCGGACATATGGCCAAGGCCAGGCGAATGATTGAAAAAGAATTGGCCATGGTCGATGTTGTGATTGAATTGGTGGATGCGCGCATACCGGTGGCCAGTAAAAACCCGCTCCTGGAAGAGATTATCGGCAAAAAGCGTCCCCACCTCATTGTTATGACCAAGGCGGACCTGGCAGACCCCGGGCGAACGGCCCATTGGCTGAGAACCTATCATGACAGGGGGTATGGTGCCATTGCCTTGGACTTGACCCGGGGCGGCAAGCAGGCGACCAAGGCACTGACGGAAGCCATTTATGACTTATCCCATGACAAACGGGCCAAGTTTATGGGCAAGGGGGCGCAAAAGGTTCGGGTCCATGCCATGATCATTGGCATTCCAAATGTGGGCAAATCCACCTTAATCAACTCGGTGGTTGGCCGTTCGGTGGCGGATACGGGCAATAAACCGGGTGTTACCAAAGGCAAACAGTGGCTGCGGCTGTCTGAGGACATTGAACTCCTGGATACGCCGGGCATCCTGTGGCCTAAATTTGAAAACGAAGACCTTGGCTATCAGCTGGCCATTACCGGGGCCATTTCCGATGATGTCTTTGTGCCTGAAGAGGCGGCCTTTCGGCTGGTGCGGCACCTCCAGGCCTATTATCCGCAGCTTTTGACGGCCCGATATGGTTTGTCATCAGATGTGCTTGATCGGGAAGATCCCTATGGCTTGATGCAAGCCATAGGCAGGCGGCGCGGGGCCCTCATCAGCGGCGGCCGGGTAGACGATCGGAAAACAGCCACCCTCTTGTTAAAAGATTACAGAAACGGCGCTATTGGCCGTATTTCACTGGAATAG
PROTEIN sequence
Length: 285
MSIQWFPGHMAKARRMIEKELAMVDVVIELVDARIPVASKNPLLEEIIGKKRPHLIVMTKADLADPGRTAHWLRTYHDRGYGAIALDLTRGGKQATKALTEAIYDLSHDKRAKFMGKGAQKVRVHAMIIGIPNVGKSTLINSVVGRSVADTGNKPGVTKGKQWLRLSEDIELLDTPGILWPKFENEDLGYQLAITGAISDDVFVPEEAAFRLVRHLQAYYPQLLTARYGLSSDVLDREDPYGLMQAIGRRRGALISGGRVDDRKTATLLLKDYRNGAIGRISLE*