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NECEvent2014_6_6_Clostridiales_50_23_scaffold_251

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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2..313
DNA (312bp) protein (104aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000365CED5
alaS; alanyl-tRNA synthetase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_2
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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318..587
DNA (270bp) protein (90aa)
UPF0297 protein BN780_00939 n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q912_9CLOT
UPF0297 protein HMPREF1634_02235 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1284708 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridi
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_3
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

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587..1021
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1123719 speci
Putative Holliday junction resolvase n=2 Tax=Clostridium acetobutylicum RepID=F0K5B7_CLOAE
yqgF; Holliday junction resolvase-like protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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1011..1313
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00035C3377
UPF0473 protein VR72_15215 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_5
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1346..2494
DNA (1149bp) protein (383aa)
Response regulator receiver modulated serine phosphatase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TIH1_HELMI
response regulator receiver modulated serine phosphatase
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:ABZ84912.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" sour
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_6
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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2503..2853
DNA (351bp) protein (117aa)
Anti-sigma F factor antagonist n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS21276.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
anti-sigma-factor antagonist
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_7
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3130..3327
DNA (198bp) protein (66aa)
UPI0002481A92 related cluster n=1 Tax=unknown RepID=UPI0002481A92
cold-shock protein
Cold-shock protein {ECO:0000313|EMBL:AIQ57746.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_8
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3501..5468
DNA (1968bp) protein (656aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZAQ4_BREBN
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67095.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_9
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5549..6028
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU23_9CLOT
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AKA70387.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_10
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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comp(6427..7302)
DNA (876bp) protein (292aa)
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:ABX32449.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ABX32449.1};; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petroto rbh
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BIW1_PETMO rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7313..7981)
DNA (669bp) protein (223aa)
L-serine dehydratase, beta subunit {ECO:0000313|EMBL:EOD01191.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EOD01191.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Ca
sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, beta subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR84_9CLOT
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_12
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8127..8471
DNA (345bp) protein (115aa)
50S ribosomal protein L19 n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHQ3_9FIRM
ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_13
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8546..9112
DNA (567bp) protein (189aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;"
Signal peptidase I n=1 Tax=Thermincola potens (strain JR) RepID=D5X8L1_THEPJ
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_14
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9109..9963
DNA (855bp) protein (285aa)
Ribosome biogenesis GTPase A n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9T181_PAEAL
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
rbgA; ribosomal biogenesis GTPase A
NECEvent2014_6_6_Clostridiales_50_23_scaffold_251_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9972..11189
DNA (1218bp) protein (406aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC rbh
asparaginyl-tRNA synthetase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288335B rbh
asparaginyl-tRNA synthetase
Displaying 15 items

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