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NECEvent2014_6_6_scaffold_317

Alias: 176_006_scaffold_317

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_scaffold_317_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..735
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98702.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter permease protein
NECEvent2014_6_6_scaffold_317_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

737..1741
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98701.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic component
NECEvent2014_6_6_scaffold_317_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1722..2468
DNA (747bp) protein (249aa)
ssuB2; aliphatic sulfonates import ATP-binding protein SsuB (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H864_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98700.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_6_scaffold_317_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2709..3596
DNA (888bp) protein (296aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Methylenetetrahydrofolate reductase n=2 Tax=Clostridium botulinum B RepID=B2TP86_CLOBB rbh
NECEvent2014_6_6_scaffold_317_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3610..4065
DNA (456bp) protein (152aa)
luxS; S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO
S-ribosylhomocysteine lyase n=2 Tax=Clostridium botulinum B RepID=B2TP85_CLOBB
NECEvent2014_6_6_scaffold_317_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4055..4744
DNA (690bp) protein (230aa)
Vitamin B12 dependent methionine synthase, activation region n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTD8_CLOSA
vitamin B12 dependent methionine synthase, activation region
Vitamin B12 dependent methionine synthase, activation region {ECO:0000313|EMBL:AGX44039.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_6_6_scaffold_317_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4698..7130
DNA (2433bp) protein (811aa)
homocysteine methyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002D9B431 rbh
B12 binding domain protein {ECO:0000313|EMBL:AIY80201.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
NECEvent2014_6_6_scaffold_317_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7194..7811)
DNA (618bp) protein (206aa)
ADP-ribose pyrophosphatase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUE8_9CLOT
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AGF58291.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacet
NECEvent2014_6_6_scaffold_317_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7988..8521
DNA (534bp) protein (178aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPQ1_CLOBO
Putative membrane protein {ECO:0000313|EMBL:EES51034.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'Bo
hypothetical protein
NECEvent2014_6_6_scaffold_317_10
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8590..9450)
DNA (861bp) protein (287aa)
EDD domain protein, DegV family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C402_9CLOT rbh
EDD domain protein, DegV family {ECO:0000313|EMBL:EEG73160.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
EDD domain protein, DegV family
NECEvent2014_6_6_scaffold_317_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9560..10156
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium ultunense Esp RepID=M1ZEE5_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCQ96649.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
TetR family transcriptional regulator
NECEvent2014_6_6_scaffold_317_12
unknown

Not on your lists

10262..10390
DNA (129bp) protein (43aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_317_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10483..12765
DNA (2283bp) protein (761aa)
helD1; helicase IV (EC:3.6.4.12)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Helicase IV n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MRH8_9CLOT rbh
NECEvent2014_6_6_scaffold_317_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12873..14048
DNA (1176bp) protein (392aa)
Metallo-beta-lactamase family protein/flavodoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CC84_9CLOT
Metallo-beta-lactamase family protein/flavodoxin {ECO:0000313|EMBL:EOR24821.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
metallo-beta-lactamase/flavodoxin
NECEvent2014_6_6_scaffold_317_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14188..14430
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR25944.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_6_scaffold_317_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14449..14844
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WKF4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84159.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_6_scaffold_317_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15679..15867
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035E17D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07653.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_6_scaffold_317_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15881..16792
DNA (912bp) protein (304aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=1 Tax=Clostridium colicanis 209318 RepID=N9XUH2_9CLOT
hprK; HPr(Ser) kinase/phosphatase
NECEvent2014_6_6_scaffold_317_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16873..18258
DNA (1386bp) protein (462aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
M18 family aminopeptidase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWW8_CLOBA
putative M18 family aminopeptidase 1
NECEvent2014_6_6_scaffold_317_20
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18680..20206
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003657713
Uncharacterized protein {ECO:0000313|EMBL:CDF12524.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
NECEvent2014_6_6_scaffold_317_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20210..20926
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LPP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB76067.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_6_scaffold_317_22
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20948..21826
DNA (879bp) protein (293aa)
Cobalt transport protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZP1_9CLOT rbh
cobalt transporter
Cobalt transporter {ECO:0000313|EMBL:AIQ72473.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
NECEvent2014_6_6_scaffold_317_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21766..23457
DNA (1692bp) protein (564aa)
UPI0003D60E7E related cluster n=1 Tax=unknown RepID=UPI0003D60E7E rbh
ABC transporter related protein {ECO:0000313|EMBL:ETI92504.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter
cbiO5; cobalt ABC transport system ATP-binding protein CbiO5
NECEvent2014_6_6_scaffold_317_24
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23436..24173
DNA (738bp) protein (246aa)
ATPase components of various ABC-type transport systems contain duplicated ATPase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MP28_9FIRM
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETT53986.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
NECEvent2014_6_6_scaffold_317_25
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24245..24490
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N388_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29962.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
bacteriophage holin family protein
NECEvent2014_6_6_scaffold_317_26
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24650..26278)
DNA (1629bp) protein (543aa)
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EFF63463.1}; EC=4.1.1.12 {ECO:0000313|EMBL:EFF63463.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichace
aspartate aminotransferase n=1 Tax=Bacillus sp. AP8 RepID=UPI0003050CB3 rbh
aspartate 4-decarboxylase
NECEvent2014_6_6_scaffold_317_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26459..27295)
DNA (837bp) protein (279aa)
PHP domain protein {ECO:0000313|EMBL:ACD23406.1}; EC=3.1.3.- {ECO:0000313|EMBL:ACD23406.1};; Uncharacterized protein {ECO:0000313|EMBL:CDH91748.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostrid
PHP domain protein n=2 Tax=Clostridium botulinum B RepID=B2TP73_CLOBB
metal-dependent phosphoesterase
NECEvent2014_6_6_scaffold_317_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27699..29273)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ71046.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
NECEvent2014_6_6_scaffold_317_29
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29462..30295
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000375B20C rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO77475.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymy
hydrogenase
NECEvent2014_6_6_scaffold_317_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30285..31175
DNA (891bp) protein (297aa)
Aminotransferase, class I/II n=3 Tax=Erysipelotrichaceae RepID=B0N5C2_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CCZ36489.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.
cystathionine beta-lyase
Displaying 30 items

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