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NECEvent2014_6_6_scaffold_408

Alias: 176_006_scaffold_408

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_scaffold_408_1
Listeria booriae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..576
DNA (576bp) protein (192aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1552123 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" sou
Probable transaldolase n=1 Tax=Listeria marthii FSL S4-120 RepID=E3YTU3_9LIST
translaldolase
NECEvent2014_6_6_scaffold_408_2
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

840..1304
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4L4_ETHHY
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU26642.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbine
NECEvent2014_6_6_scaffold_408_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1398..1709
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ86_CLOPF
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
trx; thioredoxin
NECEvent2014_6_6_scaffold_408_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1724..2581
DNA (858bp) protein (286aa)
UPI0003D59403 related cluster n=1 Tax=unknown RepID=UPI0003D59403
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:ETI90083.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
pyridine nucleotide-disulfide oxidoreductase family protein
NECEvent2014_6_6_scaffold_408_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2676..2924)
DNA (249bp) protein (83aa)
Spore coat protein F n=2 Tax=Clostridium botulinum B RepID=B2TRT4_CLOBB
Coat F domain protein {ECO:0000313|EMBL:AIY81314.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
spore coat protein CotF
NECEvent2014_6_6_scaffold_408_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2938..3123)
DNA (186bp) protein (62aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68248.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_6_scaffold_408_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3317..3832
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98567.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DedA family protein
NECEvent2014_6_6_scaffold_408_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3845..5071
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H819_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98566.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
group 1 glycosyl transferase
NECEvent2014_6_6_scaffold_408_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5052..5666
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98565.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_6_scaffold_408_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5779..6483
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98564.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
two-component response regulator
NECEvent2014_6_6_scaffold_408_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6470..8611
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFE9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98563.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
two-component sensor histidine kinase
NECEvent2014_6_6_scaffold_408_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8676..8885)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H581_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99552.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_6_scaffold_408_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9003..10034)
DNA (1032bp) protein (344aa)
Catabolite control protein A n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMV4_CLOSA rbh
ccpA; catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:AGX41863.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum
NECEvent2014_6_6_scaffold_408_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10049..11542)
DNA (1494bp) protein (498aa)
galT; galactose-1-phosphate uridylyltransferase GalT (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-g
Galactose-1-phosphate uridylyltransferase GalT n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM30_CLOSA
NECEvent2014_6_6_scaffold_408_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11555..12544)
DNA (990bp) protein (330aa)
galE2; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase GalE {ECO:0000313|EMBL:AGX41865.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AGX41865.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
UDP-glucose 4-epimerase GalE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMQ0_CLOSA rbh
NECEvent2014_6_6_scaffold_408_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12556..13728)
DNA (1173bp) protein (391aa)
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
Galactokinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N4N1_9CLOT
NECEvent2014_6_6_scaffold_408_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13930..14973
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1561 species="Bacteria; Firmicutes; Clostri
Aldose 1-epimerase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG48_9CLOT
aldose 1-epimerase family protein
NECEvent2014_6_6_scaffold_408_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15063..16097)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XUS1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ03463.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
putative acyltransferase
NECEvent2014_6_6_scaffold_408_19
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16187..16990
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5X9_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80308.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
NECEvent2014_6_6_scaffold_408_20
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17004..17570
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6XSF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD26653.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
nicotinamidase-like amidase
NECEvent2014_6_6_scaffold_408_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17699..18334
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase, subfamily IA n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REG0_CLOPF
HAD hydrolase, IA, variant 1 family protein
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:AIY82294.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ba
NECEvent2014_6_6_scaffold_408_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18343..18690
DNA (348bp) protein (116aa)
Arsenate reductase n=3 Tax=Clostridium acetobutylicum RepID=F0K5K5_CLOAE
arsC family protein
ArsC family protein {ECO:0000313|EMBL:AIY82248.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NECEvent2014_6_6_scaffold_408_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18726..19298)
DNA (573bp) protein (191aa)
Putative Hydrolase, NUDIX family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXL7_9CLOT
Putative Hydrolase, NUDIX family {ECO:0000313|EMBL:CDG00971.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
nudix domain protein
NECEvent2014_6_6_scaffold_408_24
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19353..19931)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WK14_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ03466.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
flavin reductase domain protein FMN-binding protein
NECEvent2014_6_6_scaffold_408_25
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19983..22280)
DNA (2298bp) protein (766aa)
hypF; carbamoyltransferase HypF2 (EC:2.1.3.-)
Carbamoyltransferase HypF n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CI22_9FIRM rbh
Carbamoyltransferase HypF {ECO:0000313|EMBL:ERI90154.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_6_6_scaffold_408_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22413..24419
DNA (2007bp) protein (669aa)
HAMP/methyl-accepting chemotaxis signalling domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXH2_CLOBO rbh
HAMP/methyl-accepting chemotaxis signalling domain protein {ECO:0000313|EMBL:EES50243.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain
NECEvent2014_6_6_scaffold_408_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24442..25743)
DNA (1302bp) protein (434aa)
Putative Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAR8_9CLOT
D-Ala-D-Ala carboxypeptidase 3 family protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72734.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_6_scaffold_408_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25879..26661
DNA (783bp) protein (261aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:CDH91490.1}; EC=3.5.1.- {ECO:0000313|EMBL:CDH91490.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Peptidoglycan N-acetylglucosamine deacetylase n=2 Tax=Clostridium botulinum B RepID=B2TNG9_CLOBB
peptidoglycan N-acetylglucosamine deacetylase
Displaying 28 items

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