ggKbase home page

NECEvent2014_6_6_scaffold_575_3

Organism: NECEvent2014_6_6_Clostridium_paraputrificum_30_161

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(1529..2347)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQE9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 272.0
  • Bit_score: 434
  • Evalue 9.40e-119
AP endonuclease similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 272.0
  • Bit_score: 433
  • Evalue 5.90e-119
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 272.0
  • Bit_score: 433
  • Evalue 1.70e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 819
ATGGAGAAACTTTTGTTTGGAATATCTGGTCTTCCTTTAGGCAATGAAGGAGATAAATTTACATATGCAACTGGAATTGAATATTTAAGTAATATGGGCTTAGATGCTATGGAGTTACCTTTTGTACGCTCTGTTAATGTAACTCCAAAAAATATGCATTCAATAATTGAAGCTAAGGAAAAACATAACTTTTACCTTTCTGCACATGGTTCATACTTTATAAATCTAAATGCAGTTGAAGATGAAAAAAAAGAAAAGTCCTTAGAACGAATAACACTTGGAGCTGAAGCCTTAAAATCTGTTGGGGGAAGAAGCTTAATCTTCCACCCTGGTTTCTACTTAAAAGCTACAAAAGAGGATGCTCTTGAAGAAGTTAAAAGGAACTTAATGAAGCTTCCATACTTTGGTGTAGATTATAGGTTGGAAACAACAGGTAAAGGTACTCAATTTGGAGATATTGATGAACTAATTCATATATGCAAAGAAATTGACACTTGTAAGTTATGTATAGACTTTGCTCATGTTCATGCAAGAGGAAATGGTGCTTTAAAAGAATATGATGATTTTGCTAGAATATTAGAAAAGGTTGGAGAAGGTTTAGGTAGAGAAGCTTTAGATGATTTACATATTCACCTTGCTGGTATTGCATATAGTGAAAAAGGAGAAAAGCATCACCTTCCTTTCTTAGAAAGTGATTTTAACTACCAAGCATGTATGAAGGCCTTTGTTGATTATGAGGTAAAAGGATGCGTTATTTGCGAAAGTCCAATACTTGAAAGAGATGCAAAACTATTAAAAGATACTTATGAATCACTTTAA
PROTEIN sequence
Length: 273
MEKLLFGISGLPLGNEGDKFTYATGIEYLSNMGLDAMELPFVRSVNVTPKNMHSIIEAKEKHNFYLSAHGSYFINLNAVEDEKKEKSLERITLGAEALKSVGGRSLIFHPGFYLKATKEDALEEVKRNLMKLPYFGVDYRLETTGKGTQFGDIDELIHICKEIDTCKLCIDFAHVHARGNGALKEYDDFARILEKVGEGLGREALDDLHIHLAGIAYSEKGEKHHLPFLESDFNYQACMKAFVDYEVKGCVICESPILERDAKLLKDTYESL*