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NECEvent2014_6_6_scaffold_575

Alias: 176_006_scaffold_575

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_scaffold_575_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..198
DNA (198bp) protein (66aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5Q4_9CLOT
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ89227.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_6_6_scaffold_575_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

182..1240
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUM8_CLOB8
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY83923.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulliva
NECEvent2014_6_6_scaffold_575_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1529..2347)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQE9_CLOPF
AP endonuclease
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_6_scaffold_575_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2493..3203
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F9M4_9CLOT rbh
pseudouridine synthase
NECEvent2014_6_6_scaffold_575_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3214..3756
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKK3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67428.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_6_scaffold_575_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3879..4778
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T963_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ56393.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34
RpiR family transcriptional regulator
NECEvent2014_6_6_scaffold_575_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4907..5776
DNA (870bp) protein (290aa)
short-chain dehydrogenase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288ED77
Uncharacterized protein {ECO:0000313|EMBL:EOR20024.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
short chain dehydrogenase family protein
NECEvent2014_6_6_scaffold_575_8
unknown

Not on your lists

5940..6050
DNA (111bp) protein (37aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_575_9
unknown

Not on your lists

6165..6605
DNA (441bp) protein (147aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_575_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6631..7161)
DNA (531bp) protein (177aa)
Putative Mn-containing catalase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYC2_9CLOT
Putative Mn-containing catalase {ECO:0000313|EMBL:CDG01301.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF433
hypothetical protein
NECEvent2014_6_6_scaffold_575_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7251..7394
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FS39_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD66227.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
NECEvent2014_6_6_scaffold_575_12
Exiguobacterium sp. AT1b, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7544..8056
DNA (513bp) protein (171aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L166_EXISA
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACQ69012.1}; TaxID=360911 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguo
NECEvent2014_6_6_scaffold_575_13
unknown

Not on your lists

8269..8463
DNA (195bp) protein (65aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_575_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8515..10251)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98067.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_6_scaffold_575_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10253..11992)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98066.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_6_scaffold_575_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12208..13101
DNA (894bp) protein (298aa)
Radical SAM domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TC71_CLOSG rbh
Clostridium botulinum B2 450 B2_450_contig006, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25315.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
NECEvent2014_6_6_scaffold_575_17
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13123..13803
DNA (681bp) protein (227aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
rluF; Ribosomal large subunit pseudouridine synthase F (EC:5.4.99.21)
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7U7_9CLOT
NECEvent2014_6_6_scaffold_575_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13955..14107
DNA (153bp) protein (51aa)
Conserved domain protein n=4 Tax=Clostridium botulinum RepID=B2TS03_CLOBB
hypothetical protein
Putative zinc-binding domain protein {ECO:0000313|EMBL:AIY81993.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_6_6_scaffold_575_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14410..15060
DNA (651bp) protein (217aa)
Pentapeptide repeat protein n=2 Tax=Clostridium botulinum E RepID=B2V3M8_CLOBA rbh
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:EES48931.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. '
NECEvent2014_6_6_scaffold_575_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15172..15648
DNA (477bp) protein (159aa)
Putative flavin-nucleotide-binding protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M084_CLOCD
putative flavin-nucleotide-binding protein
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:AEV66891.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
NECEvent2014_6_6_scaffold_575_21
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15876..17015
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037BD5BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68266.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_6_scaffold_575_22
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17030..17950
DNA (921bp) protein (307aa)
cell division protein n=1 Tax=Thermoanaerobacter indiensis RepID=UPI00035CC0D4
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_6_scaffold_575_23
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18115..18813
DNA (699bp) protein (233aa)
Two-component response regulator n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQL4_CLOPS
Transcriptional regulator {ECO:0000313|EMBL:KEZ87120.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
two-component response regulator
NECEvent2014_6_6_scaffold_575_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18797..20161
DNA (1365bp) protein (455aa)
Sensor histidine kinase n=3 Tax=Clostridium botulinum RepID=C3KZ86_CLOB6
Histidine kinase {ECO:0000313|EMBL:KJU72985.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
HAMP domain protein
NECEvent2014_6_6_scaffold_575_25
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20218..20457
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TPV2_THETC
putative membrane protein (DUF2078)
Uncharacterized protein {ECO:0000313|EMBL:ADL69121.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaeroba
NECEvent2014_6_6_scaffold_575_26
unknown

Not on your lists

20608..21060
DNA (453bp) protein (151aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_575_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21167..21427
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3S3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97973.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_6_scaffold_575_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21438..22295
DNA (858bp) protein (286aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97972.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying 28 items

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