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NECEvent2014_6_6_scaffold_901_3

Organism: NECEvent2014_6_6_Clostridium_paraputrificum_30_161

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(1745..2884)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, lactose/cellobiose IIC component family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLC8_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 363.0
  • Bit_score: 524
  • Evalue 7.30e-146
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] biferme similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 363.0
  • Bit_score: 524
  • Evalue 1.00e-145
PTS system, cellobiose-specific IIC component similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 363.0
  • Bit_score: 507
  • Evalue 3.40e-141

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Taxonomy

[Clostridium] bifermentans → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1140
ATGGAAGGAAATAAGTTTTTAGATAAATTAGATAGAGTTTTATCACCAATAGGAAGTAAGTTAGGAAATCAAAGACATTTAAAGGCAATATCTGCTGGTATGATGATGCCTTTAGCATTAATTGTTGTGGGAGCATTATTTTTAGTTATAGCAAACCCACCTATAAATCCAGATTTAGTTAATGCAGATACTGCAAATTTCTTTGTTAAGGGATTATTATCTTGGAAAGAATTCGCTGTTGAAAATTATGCTATGTTAACAGCACCATTTAATATGACAATGGGTATGTTTGGACTTATGAGTGCATTCTCAATTGCATACTCATTAGCTAATGAATATAAAATGAAAGCTTCTATTTCAGGATTAATCTCATTATCAGTATTTTTAATGATTTGTGCACCAGCTGTAGAAGGTGGAATTTCTACTCAATATCTAGGAGCAGATGGATTATTTGTAGCAATTATTATATCTGTACTATCTGTTGAAATATCAAGATTCCTAAAGGTTAAGGGGCTTGAGTTTAAGTTACCAGATTCAGTACCATCAGCTGTAACATCATTTATTAATTCAATATTACCTGTAGTAGCTAATATAGCAATCCTTTATGGATTAAATATTATATTAGTTTCAAGTTTAGATAAGAATTTACCAGATGCCATAATGGGTATTTTAACACCAGCTTTATCTGTAGTAGATAATTTATGGGGATTCATATTTCTAATAACTTTTTCTAACTTGTTATGGCTATTTGGAGTTAACGGAACTTCAATTATATTCCCTATAGTATTTTCATTAGGTATAGCTAACAGTGGACTAAATGCAGAATTAGTAGCGGCAGGACAAGCACCAACAAACCTTATGAACTTACAAATGTTTAGAATAGCTATCATGGGTGGAGCAGGTAATACAATAGGATTAATTATTCTTATGATGAAGAGTAGATCAACTCATTTAAAGACATTGGGAAGATTATCAATAGTACCTGGAATGTGCGGAATAAATGAACCAGTAATATTTGGTGGCCCAATTGTGTTTAACCCAATACTTGCAATTCCATTTTTAATTGCACCTATAGTGTCAGTATCACTTCGTATTCTTATTAATACCAATATCAATGTTAATATACTATCCATTCTTTAA
PROTEIN sequence
Length: 380
MEGNKFLDKLDRVLSPIGSKLGNQRHLKAISAGMMMPLALIVVGALFLVIANPPINPDLVNADTANFFVKGLLSWKEFAVENYAMLTAPFNMTMGMFGLMSAFSIAYSLANEYKMKASISGLISLSVFLMICAPAVEGGISTQYLGADGLFVAIIISVLSVEISRFLKVKGLEFKLPDSVPSAVTSFINSILPVVANIAILYGLNIILVSSLDKNLPDAIMGILTPALSVVDNLWGFIFLITFSNLLWLFGVNGTSIIFPIVFSLGIANSGLNAELVAAGQAPTNLMNLQMFRIAIMGGAGNTIGLIILMMKSRSTHLKTLGRLSIVPGMCGINEPVIFGGPIVFNPILAIPFLIAPIVSVSLRILINTNINVNILSIL*