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NECEvent2014_6_7_scaffold_860_5

Organism: NECEvent2014_6_7_UNK

partial RP 2 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: 2173..2316

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Clostridium difficile Y231 RepID=T4E8L4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 47.0
  • Bit_score: 69
  • Evalue 1.40e-09
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ67451.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 39.0
  • Bit_score: 61
  • Evalue 5.20e-07
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 40.0
  • Bit_score: 59
  • Evalue 3.50e-07

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Taxonomy

Ruminococcus gnavus CAG:126 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 144
ATGGATCTACGAATAGGTAGTGTTATACAGAGGTTAAGAAAGTTAAAGGGGCTAACACAGGAACAATTAGCAGATAGTATTGGAGTTTCAAAGGCAGCAGTATCAAAGTGGGAAAGTGGAGTTTCCCAAACAAAAGGATATTAA
PROTEIN sequence
Length: 48
MDLRIGSVIQRLRKLKGLTQEQLADSIGVSKAAVSKWESGVSQTKGY*