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NECEvent2014_6_7_scaffold_860

Alias: 176_007_scaffold_860

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_860_1
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..214
DNA (213bp) protein (71aa)
P-type ATPase, translocating n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6U2_9CLOT
HAD ATPase, P-type, IC family protein
Tax=BJP_IG2158_Thermincola_46_17
NECEvent2014_6_7_scaffold_860_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

494..1384
DNA (891bp) protein (297aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6Q9_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJU72855.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
ABC transporter
NECEvent2014_6_7_scaffold_860_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1359..1832
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68434.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformi
hypothetical protein
NECEvent2014_6_7_scaffold_860_4
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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1778..2056
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C613_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73582.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 1
hypothetical protein
NECEvent2014_6_7_scaffold_860_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2173..2316
DNA (144bp) protein (48aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile Y231 RepID=T4E8L4_CLODI
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ67451.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" sourc
putative transcriptional regulator
NECEvent2014_6_7_scaffold_860_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2469..3794
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFW03044.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
ABC transporter permease
NECEvent2014_6_7_scaffold_860_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3807..4457
DNA (651bp) protein (217aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ7_9FIRM rbh
ABC transporter {ECO:0000313|EMBL:EFW03043.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
multidrug ABC transporter ATP-binding protein
NECEvent2014_6_7_scaffold_860_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4481..5857
DNA (1377bp) protein (459aa)
Transmembrane protein Vexp3 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ6_9FIRM rbh
Transmembrane protein Vexp3 {ECO:0000313|EMBL:EFW03042.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus
transmembrane protein Vexp3
NECEvent2014_6_7_scaffold_860_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5904..6560
DNA (657bp) protein (219aa)
DNA-binding response regulator VncR n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ5_9FIRM rbh
DNA-binding response regulator VncR {ECO:0000313|EMBL:EFW03041.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Copro
transcriptional regulator
NECEvent2014_6_7_scaffold_860_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6557..7885
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; C
Sensor protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ4_9FIRM rbh
histidine kinase
NECEvent2014_6_7_scaffold_860_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8500..9666
DNA (1167bp) protein (389aa)
Cro/CI family Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ3_9FIRM rbh
Cro/CI family Transcriptional regulator {ECO:0000313|EMBL:EFW03039.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="C
hypothetical protein
NECEvent2014_6_7_scaffold_860_12
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10320..10547
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=B6FVJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFP61140.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_
NECEvent2014_6_7_scaffold_860_13
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10659..12272
DNA (1614bp) protein (538aa)
Conjugative transposon site-specific recombinase n=3 Tax=Firmicutes RepID=E7GFZ1_9FIRM rbh
Conjugative transposon site-specific recombinase {ECO:0000313|EMBL:EFW03037.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;"
conjugative transposon site-specific recombinase
NECEvent2014_6_7_scaffold_860_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12331..12882
DNA (552bp) protein (184aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=A7B1X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46537.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA-binding protein
Displaying 14 items

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