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NECEvent2014_6_7_scaffold_239

Alias: 176_007_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_239_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1420
DNA (1419bp) protein (473aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENI9_9CLOT
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDG00845.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ch
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_6_7_scaffold_239_2
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1544..2527
DNA (984bp) protein (328aa)
Oxidoreductase domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNX2_CLOC7 rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADL51937.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (st
NECEvent2014_6_7_scaffold_239_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2527..3456
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N7D5_9FIRM rbh
Oxidoreductase GFO/IDH/MOCA family {ECO:0000313|EMBL:CDD00725.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="
dehydrogenase
NECEvent2014_6_7_scaffold_239_4
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3458..4231
DNA (774bp) protein (258aa)
Acylneuraminate cytidylyltransferase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SN70_CLOC7
acylneuraminate cytidylyltransferase
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ADL51936.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovor
NECEvent2014_6_7_scaffold_239_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4325..5479
DNA (1155bp) protein (385aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU27_9CLOT rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EOR20200.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagofor
NECEvent2014_6_7_scaffold_239_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5481..6488
DNA (1008bp) protein (336aa)
N-acylneuraminate-9-phosphate synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BST3_9CLOT rbh
N-acylneuraminate-9-phosphate synthase {ECO:0000313|EMBL:EOR20199.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartago
N-acylneuraminate-9-phosphate synthase
NECEvent2014_6_7_scaffold_239_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6490..7698
DNA (1209bp) protein (403aa)
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R7J9_9BACE rbh
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein {ECO:0000313|EMBL:EEO45008.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroide
diaminopimelate decarboxylase
NECEvent2014_6_7_scaffold_239_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7718..8704
DNA (987bp) protein (329aa)
ATP-grasp domain protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R7J8_9BACE rbh
ATP-grasp domain protein {ECO:0000313|EMBL:EEO45007.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
hypothetical protein
NECEvent2014_6_7_scaffold_239_9
Aerococcus urinae, Aerococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8715..10166
DNA (1452bp) protein (484aa)
Polysaccharide biosynthesis protein n=1 Tax=Aerococcus urinae (strain ACS-120-V-Col10a) RepID=F2I721_AERUA rbh
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA01867.1}; TaxID=866775 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Aerococcus.;" source="Aerococcus urinae (strain
NECEvent2014_6_7_scaffold_239_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10249..12096
DNA (1848bp) protein (616aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAF5_9CLOT
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:EHJ02066.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL
capD; capsular polysaccharide biosynthesis protein CapD
NECEvent2014_6_7_scaffold_239_11
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12178..13896
DNA (1719bp) protein (573aa)
Capsule polysaccharide biosynthesis protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E8T3_9FIRM rbh
Capsule polysaccharide biosynthesis protein {ECO:0000313|EMBL:ERI90762.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str.
glycerophosphotransferase
NECEvent2014_6_7_scaffold_239_12
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13889..15346
DNA (1458bp) protein (486aa)
O-antigen polymerase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CJT1_9FIRM
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ACB35338.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 /
NECEvent2014_6_7_scaffold_239_13
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15366..16436
DNA (1071bp) protein (357aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EDG6_9FIRM rbh
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERI90756.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str.
glycosyl transferase family 1
NECEvent2014_6_7_scaffold_239_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16566..17171
DNA (606bp) protein (202aa)
Bacterial sugar transferase {ECO:0000313|EMBL:ACD22130.1}; Lipid carrier : UDP-N-acetylgalactosaminyltransferase {ECO:0000313|EMBL:CDH92080.1}; EC=2.4.1.- {ECO:0000313|EMBL:CDH92080.1};; TaxID=935198
Bacterial sugar transferase n=2 Tax=Clostridium botulinum B RepID=B2TQA4_CLOBB
pglB; sugar transferase
NECEvent2014_6_7_scaffold_239_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17189..18277
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCI7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96870.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative dehydrogenase
NECEvent2014_6_7_scaffold_239_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18396..19418
DNA (1023bp) protein (341aa)
exoA; succinoglycan biosynthesis protein exoA (EC:2.-.-.-)
Glycosyl transferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U368_9CLOT rbh
Glycosyl transferase {ECO:0000313|EMBL:EKQ55556.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;
NECEvent2014_6_7_scaffold_239_17
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19490..20857
DNA (1368bp) protein (456aa)
Glycosyl transferase group 1 n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKC6_9FIRM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF08685.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallire
NECEvent2014_6_7_scaffold_239_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21080..21661
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1W7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96872.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_239_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21683..22066
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96873.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GntR family transcriptional regulator
NECEvent2014_6_7_scaffold_239_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22068..22964
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEZ1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96874.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter ATP-binding protein
NECEvent2014_6_7_scaffold_239_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22945..23970
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCJ1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96875.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative membrane protein
NECEvent2014_6_7_scaffold_239_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24328..25602)
DNA (1275bp) protein (425aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2J5_9CLOT rbh
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EEH96876.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
brnQ; branched-chain amino acid transport system II carrier protein
NECEvent2014_6_7_scaffold_239_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25990..26880
DNA (891bp) protein (297aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCJ2_9CLOT rbh
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase {ECO:0000313|EMBL:EEH96880.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase
NECEvent2014_6_7_scaffold_239_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27095..27964
DNA (870bp) protein (290aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=457396 s
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K1_9CLOT rbh
NECEvent2014_6_7_scaffold_239_25
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28011..29231)
DNA (1221bp) protein (407aa)
O-antigen polymerase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7STG2_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:KAJ49429.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
exopolysaccharide biosynthesis family protein
NECEvent2014_6_7_scaffold_239_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29306..30316)
DNA (1011bp) protein (337aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophanyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEZ4_9CLOT rbh
trpS; tryptophanyl-tRNA synthetase
NECEvent2014_6_7_scaffold_239_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30708..30854)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50428.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_239_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30994..31173)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCJ6_9CLOT
Putative Conserved domain protein {ECO:0000313|EMBL:CDG01011.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4
zinc-binding domain protein
NECEvent2014_6_7_scaffold_239_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31319..32413)
DNA (1095bp) protein (365aa)
Spore germination protein (Amino acid permease) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K4_9CLOT rbh
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:EEH96886.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
spore germination family protein
NECEvent2014_6_7_scaffold_239_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32641..34056
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1X0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96887.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GerA spore germination family protein
Displaying items 1-30 of 36 in total

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