ggKbase home page

NECEvent2014_6_7_scaffold_362

Alias: 176_007_scaffold_362

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_362_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71..1144
DNA (1074bp) protein (358aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH0_9CLOT rbh
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EEH96556.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
sporulation integral membrane protein YtvI
NECEvent2014_6_7_scaffold_362_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1316..1765
DNA (450bp) protein (150aa)
Nucleoside triphosphatase YtkD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC00_9CLOT
Nucleoside triphosphatase YtkD {ECO:0000313|EMBL:EEH96557.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NUDIX hydrolase
NECEvent2014_6_7_scaffold_362_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1891..2484
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H297_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96558.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_362_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2694..3053
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Q8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96559.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cadmium efflux system accessory protein
NECEvent2014_6_7_scaffold_362_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3070..5331
DNA (2262bp) protein (754aa)
cadA; cadmium-translocating P-type ATPase (EC:3.6.3.3)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6B6_9CLOT rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EEH96560.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2
NECEvent2014_6_7_scaffold_362_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5785..6426
DNA (642bp) protein (214aa)
Redox-sensing transcriptional repressor rex n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH1_9CLOT rbh
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
oxidoreductase , NAD-binding Rossmann fold family protein
NECEvent2014_6_7_scaffold_362_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6679..7461
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC04_9CLOT rbh
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EEH96562.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.
enoyl-CoA hydratase/isomerase family protein
NECEvent2014_6_7_scaffold_362_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7552..8691
DNA (1140bp) protein (380aa)
bcd; butyryl-CoA dehydrogenase (EC:1.3.99.2)
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H299_9CLOT rbh
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EEH96563.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
NECEvent2014_6_7_scaffold_362_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8709..9488
DNA (780bp) protein (260aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Q9_9CLOT rbh
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EEH96564.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
etfB; electron transfer flavoprotein subunit beta
NECEvent2014_6_7_scaffold_362_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9510..10514
DNA (1005bp) protein (335aa)
Protein fixB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C2_9CLOT rbh
Protein fixB {ECO:0000313|EMBL:EEH96565.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
electron transfer flavoprotein, alpha subunit/FixB family protein
NECEvent2014_6_7_scaffold_362_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10653..11495
DNA (843bp) protein (281aa)
hbd; 3-hydroxybutyryl-CoA dehydrogenase Hbd (EC:1.1.1.157) rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH3_9CLOT rbh
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EEH96566.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FA
NECEvent2014_6_7_scaffold_362_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11778..12719
DNA (942bp) protein (314aa)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC07_9CLOT rbh
8-oxoguanine DNA-glycosylase (Ogg) {ECO:0000313|EMBL:EEH96567.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FA
hypothetical protein
NECEvent2014_6_7_scaffold_362_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13048..14001
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96568.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
BadF/BadG/BcrA/BcrD family ATPase
NECEvent2014_6_7_scaffold_362_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14434..15276)
DNA (843bp) protein (281aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R0_9CLOT rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EEH96569.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system IID component, Man family (TC 4.A.6)
NECEvent2014_6_7_scaffold_362_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15266..16078)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96570.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
NECEvent2014_6_7_scaffold_362_16
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16096..16572)
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EQV3_9FIRM rbh
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ERI95416.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral
NECEvent2014_6_7_scaffold_362_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16934..18103
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC10_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96572.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
AraC-type DNA-binding domain-containing proteins
NECEvent2014_6_7_scaffold_362_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18137..18415)
DNA (279bp) protein (93aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A2_9CLOT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EEH96573.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
preprotein translocase, YajC subunit
NECEvent2014_6_7_scaffold_362_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18417..18848)
DNA (432bp) protein (144aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R1_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EEH96574.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_6_7_scaffold_362_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19021..20160
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457396 species=
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C7_9CLOT rbh
NECEvent2014_6_7_scaffold_362_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20160..20684
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96576.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_362_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20831..21994
DNA (1164bp) protein (388aa)
AgaS family putative sugar isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC14_9CLOT rbh
AgaS family putative sugar isomerase {ECO:0000313|EMBL:EEH96577.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
putative phosphosugar isomerase
NECEvent2014_6_7_scaffold_362_23
unknown

Not on your lists

22009..22176
DNA (168bp) protein (56aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_362_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22208..23062
DNA (855bp) protein (285aa)
Tagatose bisphosphate family class II aldolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A4_9CLOT rbh
Tagatose bisphosphate family class II aldolase {ECO:0000313|EMBL:EEH96578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
class II aldolase, tagatose bisphosphate family
NECEvent2014_6_7_scaffold_362_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23213..24553
DNA (1341bp) protein (447aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R2_9CLOT rbh
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:EEH96579.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
NECEvent2014_6_7_scaffold_362_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24701..26191
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96580.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iron-dependent hydrogenase
NECEvent2014_6_7_scaffold_362_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26992..27276
DNA (285bp) protein (95aa)
Chaperonin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC18_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=457396 speci
groES; co-chaperonin GroES
NECEvent2014_6_7_scaffold_362_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27291..28916
DNA (1626bp) protein (542aa)
Chaperonin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A5_9CLOT rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=457396 speci
groEL; chaperonin GroEL
Displaying 28 items

View Taxonomy