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NECEvent2014_6_7_scaffold_377

Alias: 176_007_scaffold_377

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_377_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40..1620
DNA (1581bp) protein (527aa)
ATP-dependent RNA helicase DbpA (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH97_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99742.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_377_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1677..1979)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99741.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2110..2274
DNA (165bp) protein (55aa)
Rubredoxin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H954_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Rubredoxin-type Fe(Cys)4 protein
NECEvent2014_6_7_scaffold_377_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2308..3786)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4X1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99739.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
N-6 DNA methylase
NECEvent2014_6_7_scaffold_377_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3923..5341)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5B7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99738.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
TrkA C-terminal domain protein
NECEvent2014_6_7_scaffold_377_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5478..6038)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH96_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99737.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6342..7481)
DNA (1140bp) protein (380aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIP9_9CLOT rbh
hypothetical protein
NECEvent2014_6_7_scaffold_377_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7685..9502)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H950_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99735.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore cortex-lytic enzyme, pre-pro-form
NECEvent2014_6_7_scaffold_377_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9610..10329)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4W9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99734.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative metal-dependent phosphoesterase
NECEvent2014_6_7_scaffold_377_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10443..11201
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5B6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99733.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iII2; exonuclease RNase T and DNA polymerase III
NECEvent2014_6_7_scaffold_377_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11273..12073)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH94_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99732.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_6_7_scaffold_377_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12334..12987)
DNA (654bp) protein (218aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=457
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIP8_9CLOT rbh
NECEvent2014_6_7_scaffold_377_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12993..14483)
DNA (1491bp) protein (497aa)
PTS system glucose-like transporter subunit IIB (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H948_9CLOT rbh
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EEH99730.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_
NECEvent2014_6_7_scaffold_377_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14721..15458)
DNA (738bp) protein (246aa)
Carbohydrate deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01246};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4W7_9CLOT rbh
hypothetical protein
NECEvent2014_6_7_scaffold_377_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15857..18247
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXE6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJU71732.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
dual specificity phosphatase, catalytic domain protein
NECEvent2014_6_7_scaffold_377_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18497..19255)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5B5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99727.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
transcriptional activator of multidrug-efflux transporters
NECEvent2014_6_7_scaffold_377_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19508..19945
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99726.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
vhb; Bacterial hemoglobin
NECEvent2014_6_7_scaffold_377_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20049..20729)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIP5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99725.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lipoprotein
NECEvent2014_6_7_scaffold_377_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21101..21553
DNA (453bp) protein (151aa)
Cytidine deaminase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H946_9CLOT
Cytidine deaminase {ECO:0000313|EMBL:EEH99724.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cytidine deaminase
NECEvent2014_6_7_scaffold_377_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21620..21892)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4W5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99723.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22048..22794)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H5B4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99722.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative yoxB
NECEvent2014_6_7_scaffold_377_22
unknown

Not on your lists

comp(22983..23141)
DNA (159bp) protein (53aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_377_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23547..24152
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH87_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99721.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative lipopolysaccharide glycosyltransferase
NECEvent2014_6_7_scaffold_377_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24391..24630
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43031.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative polyferredoxin
NECEvent2014_6_7_scaffold_377_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25262..25822)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q4D8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ50521.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25898..26203)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50522.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26224..26562)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99719.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26710..26991)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H945_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99718.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_377_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27148..27411)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1V9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50523.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_377_30
unknown

Not on your lists

comp(27754..28041)
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 30 items

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