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NECEvent2014_6_7_scaffold_592

Alias: 176_007_scaffold_592

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_592_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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581..1570
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4M3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99495.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative lipoprotein
NECEvent2014_6_7_scaffold_592_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1606..2982)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine-D-glutamate ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H570_9CLOT rbh
NECEvent2014_6_7_scaffold_592_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3563..4954)
DNA (1392bp) protein (464aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH14_9CLOT rbh
glycyl-tRNA synthetase
NECEvent2014_6_7_scaffold_592_trna_7
unknown

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comp(5377..5448)
DNA (72bp)
transferRNA
NECEvent2014_6_7_scaffold_592_trna_6
unknown

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comp(5483..5554)
DNA (72bp)
transferRNA
NECEvent2014_6_7_scaffold_592_trna_5
unknown

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comp(5587..5658)
DNA (72bp)
transferRNA
NECEvent2014_6_7_scaffold_592_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5842..7347)
DNA (1506bp) protein (502aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIH2_9CLOT rbh
NECEvent2014_6_7_scaffold_592_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7362..7937)
DNA (576bp) protein (192aa)
Transcription elongation factor greA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y8_9CLOT rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=457396 species="Bacteria
greA1; transcription elongation factor GreA
NECEvent2014_6_7_scaffold_592_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8059..9045)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
dus; tRNA-dihydrouridine synthase 1 (EC:1.-.-.-)
NifR3 family putative TIM-barrel protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4M1_9CLOT rbh
NECEvent2014_6_7_scaffold_592_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9052..9831)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H569_9CLOT rbh
NECEvent2014_6_7_scaffold_592_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9963..11633)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=457396 spe
fhs; formate--tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate-tetrahydrofolate ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH12_9CLOT rbh
NECEvent2014_6_7_scaffold_592_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11960..13762)
DNA (1803bp) protein (601aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ATP-dependent metallopeptidase HflB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIG9_9CLOT rbh
hflB; ATP-dependent metallopeptidase HflB family protein
NECEvent2014_6_7_scaffold_592_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13808..14347)
DNA (540bp) protein (180aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y7_9CLOT rbh
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EEH99486.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_
NECEvent2014_6_7_scaffold_592_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14352..15746)
DNA (1395bp) protein (465aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L9_9CLOT rbh
tilS; tRNA(Ile)-lysidine synthetase
NECEvent2014_6_7_scaffold_592_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16077..18482)
DNA (2406bp) protein (802aa)
spoIIE; stage II sporulation protein E (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H568_9CLOT rbh
Stage II sporulation protein E {ECO:0000313|EMBL:EEH99484.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_592_13
unknown

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comp(18665..18895)
DNA (231bp) protein (77aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_592_trna_4
unknown

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comp(18958..19041)
DNA (84bp)
transferRNA
NECEvent2014_6_7_scaffold_592_trna_3
unknown

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comp(19050..19123)
DNA (74bp)
transferRNA
NECEvent2014_6_7_scaffold_592_trna_2
unknown

Not on your lists

comp(19133..19205)
DNA (73bp)
transferRNA
NECEvent2014_6_7_scaffold_592_trna_1
unknown

Not on your lists

comp(19231..19314)
DNA (84bp)
transferRNA
Displaying 20 items

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