ggKbase home page
Advanced Search
Search Help

NECEvent2014_6_7_scaffold_826_9

Organism: NECEvent2014_6_7_Clostridium_7_2_43FAA-rel_28_56

near complete RP 49 / 55 MC: 7 BSCG 51 / 51 MC: 6 ASCG 15 / 38 MC: 1
Location: 7708..11241

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2309
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 999.99
  • Bit_score: 2101
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2310
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3534
TTGTTTGAATTGAATAATTTTGATGCTATACAAATAGGCTTAGCTTCGCCTGGTCAAATAAGAGAATGGTCAAGAGGAGAAGTTAAAAAGCCTGAAACTATAAACTATAGAACTTTGAAACCAGAAAGAGATGGTCTGTTCTGTGAAAGAATATTTGGACCTATTAAAGATTGGGAATGTCATTGTGGTAAATACAAGAGAGTTAGATATAAGGGAATAGTTTGTGACAGATGTGGAGTTGAAGTTACAAAAGCTAAGGTAAGAAGAGAAAGAATGGGGCATATTGAACTGGCTGCCCCAGTTTCTCACATTTGGTACTTTAAAGGCATTCCATCAAGAATGGGATTACTTTTAGATATGTCACCAAGAGCTTTAGAAAAAATATTATACTTTGCTTCATATGTAGTAATAGATCCTAAAGAAACACCATTATTAAAGAAACAACTTCTTAACGAAAAAGAATACAGAGAAGCTGTTGATAAATATGGTGAAGAAAGCTTTATAGCTGGAATGGGAGCTGAAGCTGTTCAAGAGTTACTTGGAGAAATTAATTTAGAAGGTCAATCTAAGGAGCTTAAAGAAGAATTAAAAACAAGCACTGGACAAAAGAAAGTTAGAATTATAAGAAGATTAGAAGTTGTTGAATCTTTTAGAAAATCAGGTAATGATCCGAGATGGATGGTTATTAATGTTATACCTGTAATTCCACCAGATTTAAGACCAATGGTTCAATTAGATGGGGGAAGATTTGCTACTTCAGACTTAAATGATTTATATAGAAGAGTTATAAATAGAAATAACAGATTGAAGAAGCTTTTAGACTTAGGTGCTCCAGATATAATTGTTAGAAATGAAAAAAGAATGCTTCAAGAAGCAGTAGATGCACTTATAGATAATGGTAGAAGAGGAAGACCGGTTACAGGACCAGGAAATAGACCACTTAAATCATTATCAGATATGCTTAAAGGTAAGCAAGGTAGATTCAGACAAAACTTACTTGGTAAGAGAGTTGACTACTCAGGTAGATCAGTTATCGTTGTAGGTCCTGAATTAAAGATGTATCAATGTGGACTTCCAAAAGAAATGGCTTTAGAGTTATTCAAGCCATTTGTAATGAAGAAGTTGGTTGAAGATGGAGTAGCTCATAACATAAAGAGTGCTAAGAGAATGGTTGAAAGAGTAAATAATCAAGTATGGGACGTACTTGAAGAAGTTATTACTGATCATCCAGTTTTACTAAACCGTGCTCCTACTCTACATAGATTAGGAATTCAAGCTTTCCAACCAATATTAGTAGAAGGTAGAGCTATAAAACTACATCCACTTGTATGTACTGCATATAATGCTGACTTCGATGGAGACCAAATGGCGGTTCACGTTCCATTGTCAGTTGAAGCACAAGCAGAAGCAAGATTCTTAATGCTTGCAGCAGGAAATATAATGAAGCCTTCAGATGGTAAGCCAGTTTGTGTACCTACACAGGATATGGTATTAGGATCATACTATTTAACTATGGATAAGGCTGGAGCTAAAGGTGAAGGAAAAGTATTTGCTTCCAAAGATGAAGCTATTATGGCTTATGAAGTTGGAGAAATAGCTATTCATGCAGAAATTAATGTAAGAATATTTAAAGATGTTGATGGTGAAAAGAAGTCAGGTATAATAAAAACTACAGTTGGTAAACTGATCTTTAATGAATCAATTCCTCAAGACTTAGGATTTGTAGATAGAAGCAATAAAGATGAAGAATTCAACTTAGAAGTAGATTTCTTAATAACTAAAAAGTCATTAGGTAAGATAATCGATAAGTGTTATGCAGTGCATGGTCCAACAAATACATCAATAATGCTTGATAAAATTAAAGCATTAGGATATCACTATTCATCAATTGGAGCTGTAACAGTAGCTGCTTCTGATATGATAGTACCAGAAGCTAAGTATAGACTACTTAAAGAAGCTGATGAAACTGTTGATAAGATCGAAAAGATGTATAAGAGAGGCTTCATATCAGAAGAAGAAAGATATGAAAGAGTTATTGAAAAATGGACTAAAACAACAGAAGATGTTGCGGACGCACTTATGAATAGTTTGGATAAATTCAATCCAATATTCATGATGGCTGACTCTGGAGCCAGAGGATCTAAGTCTCAAATTAAGCAATTAGCTGGTATGAGAGGACTTATGGCAAGTCCAACTGGTAAGATTATAGAATTACCAATTAGAGCTTCATTTAGAGAAGGTCTTGAAGTGGTAGAATACTTTATCTCTACTCACGGAGCTAGAAAAGGTAATGCCGATACAGCTCTTAAGACAGCTGACTCTGGATACTTAACAAGAAGACTAGTTGACGTATCACAAGATGTTATTGTAAGAGAAATAGATTGTGGAACAACAGAAGGTATCTATGTTTCAGAAATTAAAGAAGGTAATGAAGCAATCGAAGGATTAGCAGAAAGACTTTATGGTAGATATACAGCAGAACCAATAATTCATCCAGAAACTGGTGAAGTTATGGTGGAAGCTGATCAATATATGGAACTTGACGTTGCAGAAAAAGTTGCAGCAGCAGGTGTTAAGAAAGTAAAAATTAGATCTGTATTTACATGTAAATGTAAGGTTGGTGTATGTTCGAAATGTTATGGTATGAACATGGCAACAGCACAAAAGATCAATATAGGAGAAGCTGTTGGTATAATTGCAGCACAATCAATCGGGGAACCAGGAACTCAGCTTACAATGAGAACATTCCATACAGGGGGAGTTGTTGGAGCCGATATTACACAAGGTCTTCCTAGAGTTGAAGAATTATTCGAAGCTAGAAAACCTAAAGGATTAGCTATAGTTAGTGAAATAACTGGTACAGTTAGAGTTGAAGAAACTAAGAAAAAGAGAACTGTATTTGTAATGGCTAATGATGGAGAAGAACGTAGCTATGAAATACCATTTGGTTCAAGACTAAAGGTATCTGATGATGATCTTATTGAAGCTGGAGATGAGATTACTGAAGGTTCAGTAAATCCTCATGACATAGCTGCAATTAAAGGTATAGATGGAGCTAGAAAATATCTATTATCTGAAGTTCAAAAAGTTTATAGACTTCAAGGTGTTGATATCAATGATAAGCACTTAGAGGTAGTTGTTAGACAAATGACTAGAAAAGTTAAAGTACTAGATTCAGGAGATACTGAACTATTACCAGGAACTATGATAGATATGTTTGACTTCGAAGAAGAAAATGCAAGAGTAAGAGAATTTGGTGGAGAAGAAGCTAAAGGCGAGCAAGCATTACTTGGTATAACTAAGGCTGCTTTAGCTACAGATAGTTTCTTATCAGCTGCATCATTCCAAGAAACGACAAGAGTTCTTACAGAAGCTGCTATTAAAGGAAAGATAGATCCTTTAGTAGGTCTGAAAGAAAATGTTATTATTGGTAAGTTAATACCAGCAGGTACTGGAATGATGAGATATAGGAATGTAAAGCTAGATGTCGAGGACGTTTTAGTGGAAGATGATGCATTAGAATCAATTGAATAA
PROTEIN sequence
Length: 1178
LFELNNFDAIQIGLASPGQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRALEKILYFASYVVIDPKETPLLKKQLLNEKEYREAVDKYGEESFIAGMGAEAVQELLGEINLEGQSKELKEELKTSTGQKKVRIIRRLEVVESFRKSGNDPRWMVINVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVNNQVWDVLEEVITDHPVLLNRAPTLHRLGIQAFQPILVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNIMKPSDGKPVCVPTQDMVLGSYYLTMDKAGAKGEGKVFASKDEAIMAYEVGEIAIHAEINVRIFKDVDGEKKSGIIKTTVGKLIFNESIPQDLGFVDRSNKDEEFNLEVDFLITKKSLGKIIDKCYAVHGPTNTSIMLDKIKALGYHYSSIGAVTVAASDMIVPEAKYRLLKEADETVDKIEKMYKRGFISEEERYERVIEKWTKTTEDVADALMNSLDKFNPIFMMADSGARGSKSQIKQLAGMRGLMASPTGKIIELPIRASFREGLEVVEYFISTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREIDCGTTEGIYVSEIKEGNEAIEGLAERLYGRYTAEPIIHPETGEVMVEADQYMELDVAEKVAAAGVKKVKIRSVFTCKCKVGVCSKCYGMNMATAQKINIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVVGADITQGLPRVEELFEARKPKGLAIVSEITGTVRVEETKKKRTVFVMANDGEERSYEIPFGSRLKVSDDDLIEAGDEITEGSVNPHDIAAIKGIDGARKYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKVKVLDSGDTELLPGTMIDMFDFEEENARVREFGGEEAKGEQALLGITKAALATDSFLSAASFQETTRVLTEAAIKGKIDPLVGLKENVIIGKLIPAGTGMMRYRNVKLDVEDVLVEDDALESIE*