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NECEvent2014_6_7_scaffold_826

Alias: 176_007_scaffold_826

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_826_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..112
DNA (111bp) protein (37aa)
Elongation factor Tu n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1N2_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridi
tuf; translation elongation factor Tu
NECEvent2014_6_7_scaffold_826_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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488..721
DNA (234bp) protein (78aa)
Protein translocase subunit SecE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1Q1_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
secE; preprotein translocase subunit SecE
NECEvent2014_6_7_scaffold_826_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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755..1276
DNA (522bp) protein (174aa)
Transcription termination/antitermination factor NusG n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1M8_9CLOT rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
nusG; transcription termination/antitermination factor NusG
NECEvent2014_6_7_scaffold_826_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1346..1771
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H646_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplK; ribosomal protein L11
NECEvent2014_6_7_scaffold_826_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1824..2513
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE96_9CLOT rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplA; 50S ribosomal protein L1
NECEvent2014_6_7_scaffold_826_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2722..3225
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBM4_9CLOT rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ribosomal L10 family protein
NECEvent2014_6_7_scaffold_826_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3257..3625
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H231_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.
rplL; 50S ribosomal protein L7/L12
NECEvent2014_6_7_scaffold_826_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3937..7686
DNA (3750bp) protein (1250aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1M9_9CLOT rbh
NECEvent2014_6_7_scaffold_826_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7708..11241
DNA (3534bp) protein (1178aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT rbh
NECEvent2014_6_7_scaffold_826_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11353..11634
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96414.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ribosomal protein L7Ae-like
NECEvent2014_6_7_scaffold_826_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11700..12062
DNA (363bp) protein (121aa)
30S ribosomal protein S12 n=2 Tax=Clostridium RepID=R9CL79_9CLOT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rpsL; 30S ribosomal protein S12
Displaying 11 items

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