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NECEvent2014_6_7_scaffold_36

Alias: 176_007_scaffold_36

Search features with annotation key words

Displaying items 61-90 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_36_61
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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61152..62063
DNA (912bp) protein (304aa)
Elongation factor Ts n=7 Tax=Clostridium perfringens RepID=EFTS_CLOP1 rbh
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridi
NECEvent2014_6_7_scaffold_36_62
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62156..62869
DNA (714bp) protein (238aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=10 Tax=Clostridium perfringens RepID=PYRH_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_63
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62883..63440
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=11 Tax=Clostridium perfringens RepID=RRF_CLOP1 rbh
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=488537 species="Bacteria;
NECEvent2014_6_7_scaffold_36_64
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63505..64266
DNA (762bp) protein (254aa)
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Isoprenyl transferase n=11 Tax=Clostridium perfringens RepID=ISPT_CLOPE rbh
NECEvent2014_6_7_scaffold_36_65
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64284..65078
DNA (795bp) protein (265aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Phosphatidate cytidylyltransferase n=5 Tax=Clostridium perfringens RepID=B1BG16_CLOPF rbh
NECEvent2014_6_7_scaffold_36_66
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65438..66592
DNA (1155bp) protein (385aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Clostridium perfringens RepID=DXR_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_67
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66604..67611
DNA (1008bp) protein (336aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
RIP metalloprotease RseP n=2 Tax=Clostridium perfringens RepID=Q0TPR0_CLOP1 rbh
membrane-associated zinc metalloprotease
NECEvent2014_6_7_scaffold_36_68
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67631..68680
DNA (1050bp) protein (350aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=3 Tax=Clostridium perfringens RepID=H7CX88_CLOPF rbh
NECEvent2014_6_7_scaffold_36_69
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68758..73107
DNA (4350bp) protein (1450aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=451754 species="Bacteria; Firmicut
polC; DNA polymerase III PolC (EC:2.7.7.7)
DNA polymerase III polC-type n=3 Tax=Clostridium perfringens RepID=Q0TPR2_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_70
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73340..73804
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=7 Tax=Clostridium perfringens RepID=RIMP_CLOP1 rbh
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_7_scaffold_36_71
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73824..74924
DNA (1101bp) protein (367aa)
Transcription elongation factor NusA n=7 Tax=Clostridium perfringens RepID=H7CX85_CLOPF rbh
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_6_7_scaffold_36_72
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74952..75218
DNA (267bp) protein (89aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CX84_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81394.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_7_scaffold_36_73
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75211..75513
DNA (303bp) protein (101aa)
Ribosomal protein L7Ae family protein n=7 Tax=Clostridium perfringens RepID=H7CX83_CLOPF
ribosomal protein L7Ae family protein
Ribosomal protein, L7Ae family {ECO:0000313|EMBL:EDT13816.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_6_7_scaffold_36_74
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75544..77583
DNA (2040bp) protein (680aa)
Translation initiation factor IF-2 n=9 Tax=Clostridium perfringens RepID=IF2_CLOP1 rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
infB; translation initiation factor IF-2
NECEvent2014_6_7_scaffold_36_75
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77605..77955
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=10 Tax=Clostridium perfringens RepID=RBFA_CLOP1
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_6_7_scaffold_36_76
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77959..78912
DNA (954bp) protein (318aa)
DHH subfamily 1 protein n=2 Tax=Clostridium perfringens RepID=Q0TPR9_CLOP1 rbh
DHH subfamily 1 protein
DHH subfamily 1 protein {ECO:0000313|EMBL:EDT22766.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_6_7_scaffold_36_77
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78916..79800
DNA (885bp) protein (295aa)
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=2 Tax=Clostridium perfringens RepID=TRUB_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_78
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79804..80733
DNA (930bp) protein (310aa)
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=451754 species="Bacteria; Firmicutes;
Riboflavin biosynthesis protein RibF n=3 Tax=Clostridium perfringens RepID=Q0TPS1_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_79
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


80849..81112
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=11 Tax=Clostridium perfringens RepID=RS15_CLOP1
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_6_7_scaffold_36_80
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81204..83312
DNA (2109bp) protein (703aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=451754
pnpA; polynucleotide phosphorylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Clostridium perfringens RepID=PNP_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_81
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83447..83722
DNA (276bp) protein (92aa)
PRC-barrel domain-containing protein n=11 Tax=Clostridium perfringens RepID=H7CX75_CLOPF
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:EDT26228.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
NECEvent2014_6_7_scaffold_36_82
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83736..84932
DNA (1197bp) protein (399aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Aspartokinase n=2 Tax=Clostridium perfringens RepID=Q0TPS5_CLOP1 rbh
NECEvent2014_6_7_scaffold_36_83
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84986..85675
DNA (690bp) protein (230aa)
clpP; Clp protease (EC:3.4.21.92)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XJS7_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB81383.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_7_scaffold_36_84
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85807..88197
DNA (2391bp) protein (797aa)
DNA translocase FtsK n=2 Tax=Clostridium perfringens RepID=Q0TPS7_CLOP1 rbh
DNA translocase FtsK {ECO:0000313|EMBL:EDT22751.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 36
ftsK; DNA translocase FtsK rbh
NECEvent2014_6_7_scaffold_36_85
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88266..89603
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO n=9 Tax=Clostridium perfringens RepID=RIMO_CLOP1 rbh
tRNA modifying protein
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
NECEvent2014_6_7_scaffold_36_86
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89587..90177
DNA (591bp) protein (197aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=7 Tax=Clostridium perfringens RepID=H7CX70_CLOPF rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EIA16525.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_7_scaffold_36_87
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


90313..91371
DNA (1059bp) protein (353aa)
Protein RecA n=9 Tax=Clostridium perfringens RepID=RECA_CLOP1 rbh
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=451756 species="Bacteria; Firmicute
NECEvent2014_6_7_scaffold_36_88
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91719..93254
DNA (1536bp) protein (512aa)
Ribonuclease Y {ECO:0000255|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000255|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00335};; TaxID=195102 species="Bacteria; Firmicutes; Clostridi
Ribonuclease Y n=7 Tax=Clostridium perfringens RepID=RNY_CLOP1 rbh
phosphodiesterase
NECEvent2014_6_7_scaffold_36_89
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93472..93732
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=11 Tax=Clostridium perfringens RepID=H7CX67_CLOPF
spoVS; stage V sporulation protein S
Stage V sporulation protein S {ECO:0000313|EMBL:EDT13823.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_6_7_scaffold_36_90
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93885..95078
DNA (1194bp) protein (398aa)
aspB; aspartate aminotransferase (EC:2.6.1.1) rbh
Aspartate aminotransferase {ECO:0000313|EMBL:EDT22777.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EDT22777.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Aspartate aminotransferase n=2 Tax=Clostridium perfringens RepID=Q0TPT3_CLOP1 rbh
Displaying items 61-90 of 94 in total

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