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NECEvent2014_6_7_scaffold_565

Alias: 176_007_scaffold_565

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_565_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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545..1543
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CXX9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT72759.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_565_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1792..5439
DNA (3648bp) protein (1216aa)
cpdA; 2', 3'-cyclic nucleotide 2'-phosphodiesterase (EC:3.1.3.6 3.1.4.16)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPX5_CLOPF rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT16315.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_6_7_scaffold_565_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5689..9243
DNA (3555bp) protein (1185aa)
cpdB, yfkN; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (EC:3.1.3.6 3.1.4.16)
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V048_CLOPF rbh
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT72814.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_6_7_scaffold_565_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9542..10135
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R320_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16490.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_7_scaffold_565_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10364..10969
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V046_CLOPF rbh
ruvA; Holliday junction DNA helicase RuvA
NECEvent2014_6_7_scaffold_565_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10983..12023
DNA (1041bp) protein (347aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridial
Holliday junction ATP-dependent DNA helicase RuvB n=9 Tax=Clostridium perfringens RepID=RUVB_CLOP1 rbh
NECEvent2014_6_7_scaffold_565_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12045..13070
DNA (1026bp) protein (342aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=8 Tax=Clostridium perfringens RepID=QUEA_CLOP1 rbh
NECEvent2014_6_7_scaffold_565_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13094..14236
DNA (1143bp) protein (381aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=6 Tax=Clostridium perfringens RepID=TGT_CLOP1 rbh
NECEvent2014_6_7_scaffold_565_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..14544
DNA (270bp) protein (90aa)
Preprotein translocase, YajC subunit n=2 Tax=Clostridium perfringens RepID=B1RHK1_CLOPF
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDT26553.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
yajC; preprotein translocase subunit YajC
NECEvent2014_6_7_scaffold_565_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14740..14880
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CXX0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25408.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_6_7_scaffold_565_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14950..16323
DNA (1374bp) protein (458aa)
AstB/chuR-related protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXW9_CLOPF rbh
Radical SAM domain protein {ECO:0000313|EMBL:EDS80397.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
astB/chuR-related protein
NECEvent2014_6_7_scaffold_565_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16421..17680
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=2 Tax=Clostridium perfringens RepID=B1RHK4_CLOPF rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
secD; preprotein translocase subunit SecD
NECEvent2014_6_7_scaffold_565_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17673..18542
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=8 Tax=Clostridium perfringens RepID=H7CXW7_CLOPF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
secF; preprotein translocase subunit SecF
NECEvent2014_6_7_scaffold_565_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18742..19596
DNA (855bp) protein (285aa)
DHH domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXW6_CLOPF rbh
DHH domain-containing protein
DHH domain protein {ECO:0000313|EMBL:EDT16263.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;
NECEvent2014_6_7_scaffold_565_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19640..20158
DNA (519bp) protein (173aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=289380 species="Bacteria; Firmi
Adenine phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=APT_CLOP1 rbh
Displaying 15 items

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