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NECEvent2014_6_7_scaffold_604

Alias: 176_007_scaffold_604

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_604_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1795)
DNA (1794bp) protein (598aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3S9_CLOPF rbh
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDT25027.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
von Willebrand factor type A domain-containing protein
NECEvent2014_6_7_scaffold_604_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1812..2438)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDD2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT28024.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_6_7_scaffold_604_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2441..3172)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNC1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16760.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_604_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3220..3855)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN23_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80221.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_7_scaffold_604_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3909..4433)
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000313|EMBL:EDT24946.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EDT24946.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Signal peptidase I n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNP6_CLOPF rbh
signal peptidase type I
NECEvent2014_6_7_scaffold_604_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4672..5421
DNA (750bp) protein (250aa)
Sortase B n=2 Tax=Clostridium perfringens RepID=B1BNC4_CLOPF rbh
Sortase B {ECO:0000313|EMBL:EDT16651.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sortase
NECEvent2014_6_7_scaffold_604_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5555..7759)
DNA (2205bp) protein (735aa)
Alpha-galactosidase {ECO:0000313|EMBL:EDT25089.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EDT25089.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3T5_CLOPF rbh
NECEvent2014_6_7_scaffold_604_trna_1
unknown

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comp(8053..8125)
DNA (73bp)
transferRNA
NECEvent2014_6_7_scaffold_604_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8271..8963)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSU5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18239.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_7_scaffold_604_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9283..10227)
DNA (945bp) protein (315aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=883064 s
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF rbh
NECEvent2014_6_7_scaffold_604_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10267..11283)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT16704.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT16704.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=2 Tax=Clostridium perfringens RepID=B1BNG0_CLOPF rbh
galE; UDP-glucose 4-epimerase
NECEvent2014_6_7_scaffold_604_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11361..13589)
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT72109.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_604_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14012..14659)
DNA (648bp) protein (216aa)
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ4_CLOPF rbh
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT16803.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
RNA polymerase sigma factor
NECEvent2014_6_7_scaffold_604_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15055..15948)
DNA (894bp) protein (298aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451754 s
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=3 Tax=Clostridium perfringens RepID=B1BGV2_CLOPF rbh
NECEvent2014_6_7_scaffold_604_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16266..16838)
DNA (573bp) protein (191aa)
Transcriptional regulator, LytR family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGV1_CLOPF rbh
Transcriptional regulator, LytR family {ECO:0000313|EMBL:EDS80935.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
transcriptional regulator, LytR family
NECEvent2014_6_7_scaffold_604_15
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(16959..17891)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BFD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64494.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
NECEvent2014_6_7_scaffold_604_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17950..19011)
DNA (1062bp) protein (354aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K5Q6_CLOPA
membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGK95874.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Displaying 17 items

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