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NECEvent2014_6_7_scaffold_780

Alias: 176_007_scaffold_780

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_780_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(109..1146)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTJ4_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81487.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_7_scaffold_780_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1172..1657)
DNA (486bp) protein (162aa)
PRC-barrel domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTJ3_CLOPF rbh
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:EDT13507.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_6_7_scaffold_780_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1926..3005)
DNA (1080bp) protein (360aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
tRNA-specific 2-thiouridylase MnmA n=6 Tax=Clostridium perfringens RepID=MNMA_CLOP1 rbh
NECEvent2014_6_7_scaffold_780_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3030..3458)
DNA (429bp) protein (143aa)
FeS cluster assembly scaffold protein NifU n=11 Tax=Clostridium perfringens RepID=Q0SS38_CLOPS
nifU; nifU protein
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EDT26482.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_6_7_scaffold_780_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3461..4657)
DNA (1197bp) protein (399aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=883064 species="Bacteria
Cysteine desulfurase n=6 Tax=Clostridium perfringens RepID=H7CXI0_CLOPF rbh
NECEvent2014_6_7_scaffold_780_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4650..5111)
DNA (462bp) protein (154aa)
Rrf2 family protein n=4 Tax=Clostridium perfringens RepID=Q0TPG9_CLOP1 rbh
rrf2 family protein
Rrf2 family protein {ECO:0000313|EMBL:EDT71524.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
NECEvent2014_6_7_scaffold_780_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5241..6467)
DNA (1227bp) protein (409aa)
ATPase, AAA family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R922_CLOPF rbh
ATPase, AAA family {ECO:0000313|EMBL:EDT23284.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626
recombination factor protein RarA
NECEvent2014_6_7_scaffold_780_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6690..7589)
DNA (900bp) protein (300aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSC3_CLOPF rbh
GGDEF domain protein {ECO:0000313|EMBL:EDS80250.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495
hypothetical protein
NECEvent2014_6_7_scaffold_780_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7775..8203)
DNA (429bp) protein (143aa)
MOSC domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RM55_CLOPF
Mosc domain protein {ECO:0000313|EMBL:EDT26292.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
hypothetical protein
NECEvent2014_6_7_scaffold_780_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8206..9177)
DNA (972bp) protein (324aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
Cyclic pyranopterin monophosphate synthase n=2 Tax=Clostridium perfringens RepID=MOAA_CLOPE rbh
moaA; molybdenum cofactor biosynthesis protein A
NECEvent2014_6_7_scaffold_780_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9323..10336)
DNA (1014bp) protein (338aa)
Putative molybdenum cofactor biosynthesis protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI79_CLOPF rbh
molybdopterin biosynthesis protein
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:BAB81497.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_7_scaffold_780_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10455..11051)
DNA (597bp) protein (199aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000255|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=MOBA_CLOPS rbh
molybdopterin-guanine dinucleotide biosynthesis protein-like protein
NECEvent2014_6_7_scaffold_780_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11096..12316)
DNA (1221bp) protein (407aa)
Molybdenum cofactor biosynthesis protein MoeA n=2 Tax=Clostridium perfringens RepID=B1R916_CLOPF rbh
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:BAA76925.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
moeA; molybdenum cofactor biosynthesis protein MoeA
NECEvent2014_6_7_scaffold_780_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12655..13137)
DNA (483bp) protein (161aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=5 Tax=Clostridium perfringens RepID=B1R915_CLOPF rbh
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:EDT71517.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB
Displaying 14 items

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