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NECEvent2014_6_7_scaffold_1023

Alias: 176_007_scaffold_1023

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_1023_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(109..300)
DNA (192bp) protein (64aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q0ST03_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87148.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_7_scaffold_1023_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(349..978)
DNA (630bp) protein (210aa)
Putative ribonuclease HI n=3 Tax=Clostridium perfringens RepID=B1R6U6_CLOPF rbh
Putative ribonuclease HI {ECO:0000313|EMBL:EDT24060.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
ribonuclease HI
NECEvent2014_6_7_scaffold_1023_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(994..1965)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPS5_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26259.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_7_scaffold_1023_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2078..3106)
DNA (1029bp) protein (343aa)
Rhomboid family protein n=3 Tax=Clostridium perfringens RepID=B1RIG8_CLOPF rbh
Rhomboid family protein {ECO:0000313|EMBL:EDT26276.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
rhomboid family protein
NECEvent2014_6_7_scaffold_1023_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3124..4923)
DNA (1800bp) protein (600aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQ01_CLOPF rbh
Oligoendopeptidase F {ECO:0000313|EMBL:EIA16969.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_7_scaffold_1023_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4944..5342)
DNA (399bp) protein (133aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CWI5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_6_7_scaffold_1023_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5511..5846
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQ03_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14858.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_7_scaffold_1023_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5919..6587
DNA (669bp) protein (223aa)
Putative zinc ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQ04_CLOPF rbh
ABC-type iron (III) transport system, ATPase
Putative zinc ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABG87446.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_6_7_scaffold_1023_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6606..7415
DNA (810bp) protein (270aa)
Metal (Zinc) transport protein (ABC transporter permease) zurM n=10 Tax=Clostridium perfringens RepID=H7CWI8_CLOPF rbh
metal (zinc) transport protein (ABC transporter permease) zurM
Putative zinc ABC transporter, permease protein {ECO:0000313|EMBL:ABG87222.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_7_scaffold_1023_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7573..8964)
DNA (1392bp) protein (464aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPY8_CLOPF rbh
MATE efflux family protein {ECO:0000313|EMBL:EIA16974.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
MATE efflux family protein
Displaying 10 items

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